Domain Predictions — View

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PTHR35743

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003697 View details of GO:0003697 AmiGO InterPro QuickGO	Molecular function	Single-stranded DNA binding	Interacting selectively and non-covalently with single-stranded DNA.	Subterm of GO:0003677
GO:0009908 View details of GO:0009908 AmiGO InterPro QuickGO	Biological process	Flower development	The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.	Subterm of GO:0090567

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v0743230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein [Lotus japonicus] gi\|4138131\|emb\|CAA09791.1\|	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR35743 PTHR35743:SF1 TRANSMEMBRANE	6
Lj2g3v0743240.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein [Lotus japonicus] gi\|4138131\|emb\|CAA09791.1\|	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR35743 PTHR35743:SF1 TRANSMEMBRANE	6
Lj2g3v1550660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains PTHR35743 PTHR35743:SF1	3
Lj3g3v1652330.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX2 homeobox protein [Lotus japonicus] gi\|4138133\|emb\|CAA09792.1\|	Domains IPR001356 PS50071 PTHR35743 PTHR35743:SF1 SM00389 SignalP-noTM_EUK cd00086 mobidb-lite	8
Lj3g3v1652340.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX2 homeobox protein [Lotus japonicus] gi\|4138133\|emb\|CAA09792.1\|	Domains IPR001356 NON_CYTOPLASMIC_DOMAIN PS50071 PTHR35743 PTHR35743:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00389 SignalP-noTM_EUK cd00086 mobidb-lite	13
Lj3g3v3154030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein [Lotus japonicus] gi\|4138131\|emb\|CAA09791.1\|	Domains G3DSA:1.10.10.60 IPR001356 IPR009057 NON_CYTOPLASMIC_DOMAIN PS50071 PTHR35743 PTHR35743:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00389 SSF46689 SignalP-noTM_EUK cd00086 mobidb-lite	16
Lj3g3v3154040.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein [Lotus japonicus] gi\|4138131\|emb\|CAA09791.1\|	Domains G3DSA:1.10.10.60 IPR001356 IPR009057 NON_CYTOPLASMIC_DOMAIN PS50071 PTHR35743 PTHR35743:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00389 SSF46689 SignalP-noTM_EUK cd00086 mobidb-lite	16
Lj4g3v1983440.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX3 protein [Lotus japonicus] gi\|4138135\|emb\|CAA09793.1\|	Domains PTHR35743 PTHR35743:SF1	3
LotjaGi2g1v0368500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein; TAIR: AT4G03090.2 sequence-specific DNA binding transcription factor ATNDX; Swiss-Prot: sp\|F4JI44\|NDX_ARATH Nodulin homeobox; TrEMBL-Plants: tr\|Q9ZRY4\|Q9ZRY4_LOTJA NDX1 homeobox protein; Found in the gene: LotjaGi2g1v0368500	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.10.60 IPR001356 IPR009057 IPR039325 NON_CYTOPLASMIC_DOMAIN PS50071 PTHR35743 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00389 SSF46689 TRANSMEMBRANE cd00086 mobidb-lite	17
LotjaGi2g1v0368500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein; TAIR: AT4G03090.2 sequence-specific DNA binding transcription factor ATNDX; Swiss-Prot: sp\|F4JI44\|NDX_ARATH Nodulin homeobox; TrEMBL-Plants: tr\|Q9ZRY4\|Q9ZRY4_LOTJA NDX1 homeobox protein; Found in the gene: LotjaGi2g1v0368500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.10.60 IPR001356 IPR009057 IPR039325 NON_CYTOPLASMIC_DOMAIN PS50071 PTHR35743 SM00389 SSF46689 TRANSMEMBRANE cd00086 mobidb-lite	14
LotjaGi3g1v0279500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NDX1 homeobox protein; TAIR: AT4G03090.5 sequence-specific DNA binding transcription factor ATNDX; Swiss-Prot: sp\|F4JI44\|NDX_ARATH Nodulin homeobox; TrEMBL-Plants: tr\|Q9ZRY3\|Q9ZRY3_LOTJA NDX2 homeobox protein; Found in the gene: LotjaGi3g1v0279500	Domains IPR001356 IPR039325 PS50071 PTHR35743 SM00389 cd00086 mobidb-lite	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	9.09