Domain Predictions — View

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PTHR36340

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0009535 View details of GO:0009535 AmiGO InterPro QuickGO	Cellular component	Chloroplast thylakoid membrane	The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.	Subterm of GO:0044434 GO:0055035 Part of GO:0009534
GO:0009773 View details of GO:0009773 AmiGO InterPro QuickGO	Biological process	Photosynthetic electron transport in photosystem I	A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, X) through a chain of electron transport molecules in the thylakoid membrane until they reach ferredoxin which passes the electron to the ultimate electron acceptor; NADP.	Subterm of GO:0009767
GO:0010598 View details of GO:0010598 AmiGO InterPro QuickGO	Cellular component	NAD(P)H dehydrogenase complex (plastoquinone)	Complex that possesses NAD(P)H dehydrogenase (plastoquinone) activity. The complex is one of the components of the electron transport chain. It is involved in electron transport from an unidentified electron donor, possibly NADH, NADPH or ferredoxin(Fd) to the plastoquinone pool.	Subterm of GO:0044424 GO:0098796

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0065100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chlororespiratory reduction 3; TAIR: AT2G01590.1 chlororespiratory reduction 3; Swiss-Prot: sp\|Q9ZVE7\|CRR3_ARATH Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic; TrEMBL-Plants: tr\|I1KKS8\|I1KKS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0065100	Domains CYTOPLASMIC_DOMAIN IPR038931 NON_CYTOPLASMIC_DOMAIN PTHR36340 TMhelix TRANSMEMBRANE mobidb-lite	7
LotjaGi5g1v0287000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chlororespiratory reduction 3; TAIR: AT2G01590.1 chlororespiratory reduction 3; Swiss-Prot: sp\|Q9ZVE7\|CRR3_ARATH Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic; TrEMBL-Plants: tr\|I1KKS8\|I1KKS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0287000	Domains CYTOPLASMIC_DOMAIN IPR038931 NON_CYTOPLASMIC_DOMAIN PTHR36340 SignalP-TM TMhelix TRANSMEMBRANE mobidb-lite	8
LotjaGi5g1v0287000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chlororespiratory reduction 3; TAIR: AT2G01590.1 chlororespiratory reduction 3; Swiss-Prot: sp\|Q9ZVE7\|CRR3_ARATH Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic; TrEMBL-Plants: tr\|I1KKS8\|I1KKS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0287000	Domains CYTOPLASMIC_DOMAIN IPR038931 NON_CYTOPLASMIC_DOMAIN PTHR36340 SignalP-TM TMhelix TRANSMEMBRANE mobidb-lite	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33