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TIGR00420

Source: TIGRFAM

Description

trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008033
Biological process TRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
Subterm of
GO:0016740
Molecular function Transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
Subterm of

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi3g1v0492700.1
– TRNA-specific 2-thiouridylase mnmA; TAIR: AT1G51310.1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Swiss-Prot: sp|O51625|MNMA_BORBU tRNA-specific 2-thiouridylase MnmA; TrEMBL-Plants: tr|I1LJW0|I1LJW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492700
Domains
13
LotjaGi3g1v0492700.2
– TRNA-specific 2-thiouridylase mnmA; TAIR: AT1G51310.1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Swiss-Prot: sp|O51625|MNMA_BORBU tRNA-specific 2-thiouridylase MnmA; TrEMBL-Plants: tr|K7LPK5|K7LPK5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492700
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01998 CDD 1 50.00