Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TIGR01130

Source: TIGRFAM

Description

ER_PDI_fam: protein disulfide isomerase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003756 View details of GO:0003756 AmiGO InterPro QuickGO	Molecular function	Protein disulfide isomerase activity	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.	Subterm of GO:0016864 GO:0140096

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0841310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase-like protein precursor [Glycine max] gi\|351722359\|ref\|NP_001238009.1\|	Domains Coil G3DSA:3.40.30.10 IPR005788 IPR005792 IPR012336 IPR013766 IPR017937 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF109 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	31
Lj3g3v3085830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase L-2 [Medicago truncatula] gi\|357472209\|ref\|XP_003606389.1\|	Domains G3DSA:3.40.30.10 IPR005788 IPR005792 IPR012336 IPR013766 IPR017937 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF74 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM_GRAM_NEGATIVE SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	30
LotjaGi1g1v0262100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT1G77510.1 PDI-like 1-2; Swiss-Prot: sp\|P29828\|PDI_MEDSA Protein disulfide-isomerase; TrEMBL-Plants: tr\|I7FST9\|I7FST9_SOYBN Protein disulfide-isomerase; Found in the gene: LotjaGi1g1v0262100	Domains Coil G3DSA:3.40.30.10 IPR005788 IPR005792 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF205 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	30
LotjaGi2g1v0360200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp\|Q9FF55\|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr\|G7JPD1\|G7JPD1_MEDTR Protein disulfide-isomerase; Found in the gene: LotjaGi2g1v0360200	Domains G3DSA:3.40.30.10 IPR005788 IPR005792 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF195 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	29
LotjaGi3g1v0162500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp\|Q9FF55\|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr\|A0A0R0HDA3\|A0A0R0HDA3_SOYBN Protein disulfide-isomerase; Found in the gene: LotjaGi3g1v0162500	Domains G3DSA:3.40.30.10 IPR005788 IPR005792 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF195 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TIGR01126 TIGR01130 cd02961 cd02981 cd02982 cd02995 mobidb-lite	28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00