Domain Predictions — View

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cd02961

Source: CDD

Description

PDI_a_family

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0841310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase-like protein precursor [Glycine max] gi\|351722359\|ref\|NP_001238009.1\|	Domains Coil G3DSA:3.40.30.10 IPR005788 IPR005792 IPR012336 IPR013766 IPR017937 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF109 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	31
Lj3g3v0235110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase L-3b [Glycine max] gi\|255291798\|dbj\|BAH89252.1\|	Domains G3DSA:3.40.30.10 IPR012336 IPR013766 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PS51352 PTHR18929 PTHR18929:SF59 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-noTM_EUK cd02961 cd02981 cd02982	18
Lj3g3v1010870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein disulfide-isomerase 5-4-like [Glycine max] gi\|356517290\|ref\|XP_003527321.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.30.10 IPR012336 IPR012936 IPR013766 NON_CYTOPLASMIC_DOMAIN PF00085 PF07970 PF13850 PS51352 PTHR10984 PTHR10984:SF37 SSF52833 TMhelix TRANSMEMBRANE cd02961 mobidb-lite	17
Lj3g3v3085830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase L-2 [Medicago truncatula] gi\|357472209\|ref\|XP_003606389.1\|	Domains G3DSA:3.40.30.10 IPR005788 IPR005792 IPR012336 IPR013766 IPR017937 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF74 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM_GRAM_NEGATIVE SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	30
LotjaGi1g1v0262100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT1G77510.1 PDI-like 1-2; Swiss-Prot: sp\|P29828\|PDI_MEDSA Protein disulfide-isomerase; TrEMBL-Plants: tr\|I7FST9\|I7FST9_SOYBN Protein disulfide-isomerase; Found in the gene: LotjaGi1g1v0262100	Domains Coil G3DSA:3.40.30.10 IPR005788 IPR005792 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF205 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	30
LotjaGi2g1v0360200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp\|Q9FF55\|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr\|G7JPD1\|G7JPD1_MEDTR Protein disulfide-isomerase; Found in the gene: LotjaGi2g1v0360200	Domains G3DSA:3.40.30.10 IPR005788 IPR005792 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF195 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TIGR01126 TIGR01130 TMhelix cd02961 cd02981 cd02982 cd02995 mobidb-lite	29
LotjaGi3g1v0017700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase like protein; TAIR: AT3G16110.1 PDI-like 1-6; Swiss-Prot: sp\|Q66GQ3\|PDI16_ARATH Protein disulfide isomerase-like 1-6; TrEMBL-Plants: tr\|C6KXH6\|C6KXH6_SOYBN Protein disulfide isomerase L-3b; Found in the gene: LotjaGi3g1v0017700	Domains G3DSA:3.40.30.10 IPR013766 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PS51352 PTHR18929 PTHR18929:SF189 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-noTM cd02961 cd02981 cd02982	18
LotjaGi3g1v0149200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase; TAIR: AT4G27080.1 PDI-like 5-4; Swiss-Prot: sp\|Q9T042\|PDI54_ARATH Protein disulfide-isomerase 5-4; TrEMBL-Plants: tr\|A0A0B2SSL7\|A0A0B2SSL7_GLYSO Protein disulfide-isomerase 5-4; Found in the gene: LotjaGi3g1v0149200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.30.10 IPR012936 IPR013766 IPR036249 IPR039542 NON_CYTOPLASMIC_DOMAIN PF00085 PF07970 PF13850 PS51352 PTHR10984 PTHR10984:SF61 SSF52833 TMhelix TRANSMEMBRANE cd02961 mobidb-lite	18
LotjaGi3g1v0149200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase; TAIR: AT4G27080.1 PDI-like 5-4; Swiss-Prot: sp\|Q9T042\|PDI54_ARATH Protein disulfide-isomerase 5-4; TrEMBL-Plants: tr\|A0A0B2SSL7\|A0A0B2SSL7_GLYSO Protein disulfide-isomerase 5-4; Found in the gene: LotjaGi3g1v0149200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.30.10 IPR012936 IPR013766 IPR036249 IPR039542 NON_CYTOPLASMIC_DOMAIN PF00085 PF07970 PF13850 PS51352 PTHR10984 PTHR10984:SF61 SSF52833 TMhelix TRANSMEMBRANE cd02961 mobidb-lite	18
LotjaGi3g1v0162500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp\|Q9FF55\|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr\|A0A0R0HDA3\|A0A0R0HDA3_SOYBN Protein disulfide-isomerase; Found in the gene: LotjaGi3g1v0162500	Domains G3DSA:3.40.30.10 IPR005788 IPR005792 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF195 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TIGR01126 TIGR01130 cd02961 cd02981 cd02982 cd02995 mobidb-lite	28
LotjaGi3g1v0237800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase 5-4; TAIR: AT4G27080.1 PDI-like 5-4; Swiss-Prot: sp\|Q9T042\|PDI54_ARATH Protein disulfide-isomerase 5-4; TrEMBL-Plants: tr\|I1LUQ2\|I1LUQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0237800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.30.10 IPR012936 IPR013766 IPR036249 IPR039542 NON_CYTOPLASMIC_DOMAIN PF00085 PF07970 PF13850 PS51352 PTHR10984 PTHR10984:SF61 SSF52833 TMhelix TRANSMEMBRANE cd02961	17
LotjaGi4g1v0203200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp\|Q9FF55\|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr\|A9NWK0\|A9NWK0_PICSI Protein disulfide-isomerase; Found in the gene: LotjaGi4g1v0203200_LC	Domains G3DSA:3.40.30.10 IPR013766 IPR036249 PF00085 PTHR18929 PTHR18929:SF217 SSF52833 cd02961	8
LotjaGi5g1v0280900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase-like protein, putative; TAIR: AT1G35620.1 PDI-like 5-2; Swiss-Prot: sp\|Q94F09\|PDI52_ARATH Protein disulfide-isomerase 5-2; TrEMBL-Plants: tr\|A0A072VPJ1\|A0A072VPJ1_MEDTR Protein disulfide isomerase-like protein, putative; Found in the gene: LotjaGi5g1v0280900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.30.10 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF218 SSF52833 TMhelix TRANSMEMBRANE cd02961 mobidb-lite	18
LotjaGi5g1v0280900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein disulfide isomerase-like protein, putative; TAIR: AT1G35620.1 PDI-like 5-2; Swiss-Prot: sp\|Q94F09\|PDI52_ARATH Protein disulfide-isomerase 5-2; TrEMBL-Plants: tr\|A0A072VPJ1\|A0A072VPJ1_MEDTR Protein disulfide isomerase-like protein, putative; Found in the gene: LotjaGi5g1v0280900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.30.10 IPR013766 IPR017937 IPR036249 NON_CYTOPLASMIC_DOMAIN PF00085 PF13848 PR00421 PS00194 PS51352 PTHR18929 PTHR18929:SF218 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52833 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd02961 mobidb-lite	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.14