Domain Predictions — View

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TIGR01657

Source: TIGRFAM

Description

P-ATPase-V: P-type ATPase of unknown pump specificity (type V)

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006812 View details of GO:0006812 AmiGO InterPro QuickGO	Biological process	Cation transport	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.	Subterm of GO:0006811
GO:0016021 View details of GO:0016021 AmiGO InterPro QuickGO	Cellular component	Integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.	Subterm of GO:0031224
GO:0016887 View details of GO:0016887 AmiGO InterPro QuickGO	Molecular function	ATPase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.	Subterm of GO:0017111

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1385230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable cation-transporting ATPase-like [Cicer arietinum] gi\|502137236\|ref\|XP_004503017.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.70.150.10 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006544 IPR008250 IPR018303 IPR023214 IPR023299 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PTHR24093 PTHR24093:SF82 SSF56784 SSF81653 SSF81660 SSF81665 TIGR01494 TIGR01657 TMhelix TRANSMEMBRANE mobidb-lite	28
LotjaGi1g1v0329600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cation-transporting ATPase; TAIR: AT5G23630.1 phosphate deficiency response 2; Swiss-Prot: sp\|Q9LT02\|PDR2_ARATH Probable manganese-transporting ATPase PDR2; TrEMBL-Plants: tr\|A0A1J7H704\|A0A1J7H704_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329600	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.70.150.10 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006544 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PTHR45630 PTHR45630:SF7 SFLDF00027 SFLDG00002 SSF56784 SSF81653 SSF81660 SSF81665 TIGR01494 TIGR01657 TMhelix TRANSMEMBRANE cd07543 mobidb-lite	33

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00