Domain Predictions — View

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PS01229

Source: ProSitePatterns

Description

Hypothetical cof family signature 2.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0075159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zn/Cd P(IB)-type ATPase [Medicago truncatula] gi\|357479567\|ref\|XP_003610069.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR018303 IPR023214 IPR023299 NON_CYTOPLASMIC_DOMAIN PF00702 PR00119 PS00154 PS01229 PTHR24093 PTHR24093:SF318 SSF56784 TIGR01494 TMhelix TRANSMEMBRANE mobidb-lite	19
Lj0g3v0295639.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Haloacid dehalogenase-like hydrolase family protein isoform 2 [Theobroma cacao] gi\|508782554\|gb\|EOY29810.1\|	Domains G3DSA:3.30.1240.10 G3DSA:3.40.390.30 G3DSA:3.40.50.1000 IPR000150 IPR002036 IPR006379 IPR020549 IPR023091 IPR023214 MF_00009 PF02130 PF08282 PS01228 PS01229 PS01306 PTHR10000 PTHR10000:SF8 SFLDG01144 SSF55486 SSF56784 TIGR00043 TIGR00099 TIGR01484 cd01427	24
Lj1g3v1385230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable cation-transporting ATPase-like [Cicer arietinum] gi\|502137236\|ref\|XP_004503017.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.70.150.10 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006544 IPR008250 IPR018303 IPR023214 IPR023299 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PTHR24093 PTHR24093:SF82 SSF56784 SSF81653 SSF81660 SSF81665 TIGR01494 TIGR01657 TMhelix TRANSMEMBRANE mobidb-lite	28
Lj6g3v1371840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi\|356532650\|ref\|XP_003534884.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.10 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023299 IPR027256 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PS50846 PTHR24093 PTHR24093:SF318 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371	31
LotjaGi1g1v0222600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Endoribonuclease YbeY; TAIR: AT2G25870.1 haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp\|Q5XD45\|Y533_STRP6 Putative phosphatase M6_Spy0533; TrEMBL-Plants: tr\|I1M9Z5\|I1M9Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0222600	Domains G3DSA:3.30.1240.10 G3DSA:3.40.390.30 G3DSA:3.40.50.1000 IPR000150 IPR002036 IPR006379 IPR020549 IPR023091 IPR023214 IPR036412 MF_00009 PF02130 PF08282 PS01228 PS01229 PS01306 PTHR46986 PTHR46986:SF1 SFLDG01140 SFLDS00003 SSF55486 SSF56784 TIGR00043 TIGR00099 TIGR01484 cd07516	26
LotjaGi1g1v0222600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Endoribonuclease YbeY; TAIR: AT2G25870.1 haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp\|Q5XD45\|Y533_STRP6 Putative phosphatase M6_Spy0533; TrEMBL-Plants: tr\|A0A0B2SRP5\|A0A0B2SRP5_GLYSO Putative rRNA maturation factor; Found in the gene: LotjaGi1g1v0222600	Domains G3DSA:3.30.1240.10 G3DSA:3.40.390.30 G3DSA:3.40.50.1000 IPR000150 IPR002036 IPR006379 IPR020549 IPR023091 IPR023214 IPR036412 MF_00009 PF02130 PF08282 PS01228 PS01229 PS01306 PTHR46986 PTHR46986:SF1 SFLDG01140 SFLDS00003 SSF55486 SSF56784 TIGR00043 TIGR00099 TIGR01484 cd07516	26
LotjaGi1g1v0329600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cation-transporting ATPase; TAIR: AT5G23630.1 phosphate deficiency response 2; Swiss-Prot: sp\|Q9LT02\|PDR2_ARATH Probable manganese-transporting ATPase PDR2; TrEMBL-Plants: tr\|A0A1J7H704\|A0A1J7H704_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329600	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.70.150.10 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006544 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PTHR45630 PTHR45630:SF7 SFLDF00027 SFLDG00002 SSF56784 SSF81653 SSF81660 SSF81665 TIGR01494 TIGR01657 TMhelix TRANSMEMBRANE cd07543 mobidb-lite	33
LotjaGi4g1v0304700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT2G19110.1 heavy metal atpase 4; Swiss-Prot: sp\|O64474\|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4; TrEMBL-Plants: tr\|K7LWU0\|K7LWU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0304800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00120 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi6g1v0241300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A151RDQ6\|A0A151RDQ6_CAJCA Putative cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi6g1v0241300	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF5 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02079	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02079	CDD	1	9.09