Domain Predictions — View

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TIGR02245

Source: TIGRFAM

Description

HAD_IIID1: HAD hydrolase, family IIID

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004721 View details of GO:0004721 AmiGO InterPro QuickGO	Molecular function	Phosphoprotein phosphatase activity	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.	Subterm of GO:0016791 GO:0140096
GO:0005634 View details of GO:0005634 AmiGO InterPro QuickGO	Cellular component	Nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.	Subterm of GO:0043231

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2690700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ubiquitin-like domain-containing CTD phosphatase-like [Glycine max] gi\|356525365\|ref\|XP_003531295.1\|	Domains Coil G3DSA:3.10.20.90 G3DSA:3.40.50.1000 IPR000626 IPR004274 IPR011943 IPR023214 IPR029071 PF00240 PF03031 PS50053 PS50969 PTHR32054 PTHR32054:SF0 SM00213 SM00577 SSF54236 SSF56784 TIGR02245	19
LotjaGi4g1v0387500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin-like domain-containing CTD phosphatase; TAIR: AT4G06599.1 ubiquitin family protein; Swiss-Prot: sp\|Q8W3M6\|UBCP_ARATH Ubiquitin-like domain-containing CTD phosphatase; TrEMBL-Plants: tr\|I3SL87\|I3SL87_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0387500	Domains Coil G3DSA:3.10.20.90 G3DSA:3.40.50.1000 IPR000626 IPR004274 IPR011943 IPR023214 IPR029071 IPR036412 PF00240 PF03031 PS50053 PS50969 PTHR32054 PTHR32054:SF0 SM00213 SM00577 SSF54236 SSF56784 TIGR02245 cd01813	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01813	CDD	1	50.00