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cd01650

Description

RT_nLTR_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 56

Transcript Name Description Predicted domains Domain count
LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like protein [Theobroma cacao] gi|508700971|gb|EOX92867.1| 9
Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151SF42|A0A151SF42_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0009100_LC 7
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0012000_LC 13
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0015200_LC 17
LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A1D5U5S1|A0A1D5U5S1_WHEAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0135000_LC 7
Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|A0A151U6Y2|A0A151U6Y2_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0167300_LC 11
LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0V5|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi1g1v0177200_LC 12
1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCF7|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0206900_LC 16
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0228200_LC 14
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A5CAA2|A5CAA2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0310100_LC 10
LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151RPJ0|A0A151RPJ0_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi1g1v0443100_LC 10
Retrovirus-related Pol polyprotein LINE-1; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151QPK4|A0A151QPK4_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi1g1v0516500_LC 7
Reverse transcriptase; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|F4NCI7|F4NCI7_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0570300_LC 22
LINE-1 reverse transcriptase like; TAIR: ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein (ChrM); Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0570500_LC 14
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0627300_LC 17
LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0V5|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi1g1v0638200_LC 10
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0781300_LC 17
LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0003500_LC 19
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0087300_LC 18
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|A0A151SIK8|A0A151SIK8_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0088300_LC 7
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151SF42|A0A151SF42_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0130400_LC 11
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi2g1v0157700_LC 13
LINE-1 reverse transcriptase homolog; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|J7G2Z7|J7G2Z7_ROSRU Non-ltr retroelement reverse transcriptase; Found in the gene: LotjaGi2g1v0166900_LC 8
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151R3M6|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi2g1v0202500_LC 20
Reverse transcriptase; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|F4NCJ4|F4NCJ4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0215900_LC 15
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0218800_LC 11
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi2g1v0424700_LC 13
LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|F4NCJ4|F4NCJ4_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0145100_LC 15
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi3g1v0161700_LC 13
LINE-1 reverse transcriptase like; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCF7|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0174500_LC 8
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi3g1v0234100_LC 10
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCF7|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0326800_LC 22
LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi3g1v0334000_LC 11
LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151R3M6|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0434200_LC 20
LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0456900_LC 21
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi3g1v0463700_LC 13
LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0104300_LC 8
LINE-1 reverse transcriptase-like protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|Q2QQV8|Q2QQV8_ORYSJ Retrotransposon protein, putative, unclassified; Found in the gene: LotjaGi4g1v0142100_LC 7
LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0184200_LC 7
LINE-1 reverse transcriptase homolog; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0J8BAS0|A0A0J8BAS0_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0292700_LC 8
LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0293300_LC 7
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0326700_LC 12
Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|Q2HUN6|Q2HUN6_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Found in the gene: LotjaGi5g1v0073400_LC 12
LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0120100_LC 18
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151RI96|A0A151RI96_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi5g1v0120800_LC 16
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0208900_LC 19
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219100_LC 20
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0293200_LC 10
RNA-directed DNA polymerase (Reverse transcriptase); TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|M5XSK0|M5XSK0_PRUPE Uncharacterized protein; Found in the gene: LotjaGi5g1v0309300_LC 18
Transposon TX1 uncharacterized; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0V5|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi5g1v0332300_LC 4
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi6g1v0039500_LC 12
LINE-1 reverse transcriptase; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151RWQ0|A0A151RWQ0_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi6g1v0142200_LC 8
LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi6g1v0160400_LC 17
LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi6g1v0191000_LC 17
Retrovirus-related Pol polyprotein LINE-1; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151U6Y2|A0A151U6Y2_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi6g1v0214900_LC 7
LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0A9JT64|A0A0A9JT64_ARUDO Uncharacterized protein; Found in the gene: LotjaGi6g1v0317500_LC 6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01650 CDD 1 1.79