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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9Y0Y2|PURA_DROME Adenylosuccinate synthetase; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0083900_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SYN1|PEN6_ARATH Seco-amyrin synthase; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0111900_LC | 5 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT3G51740.1 inflorescence meristem receptor-like kinase 2; Swiss-Prot: sp|O83890|Y920_TREPA TPR repeat-containing protein TP_0920; TrEMBL-Plants: tr|A0A0B2RFW9|A0A0B2RFW9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0163200_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P22098|TRPC_VIBPA Tryptophan biosynthesis protein TrpCF; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0200800_LC | 5 | ||
– | Glucosamine-6-phosphate deaminase; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|A6T6C1|NAGB_KLEP7 Glucosamine-6-phosphate deaminase; TrEMBL-Plants: tr|A0A151S8Y9|A0A151S8Y9_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi1g1v0203100_LC | 5 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0228200_LC | 14 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151R3M6|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi1g1v0262600_LC | 5 | ||
– | Transposon TX1 uncharacterized; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A5BA98|A5BA98_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0263700_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|G5ECQ2|FRIZ2_CAEEL Frizzled-2; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0302600_LC | 7 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0313700_LC | 8 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CAA2|A5CAA2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0344200_LC | 9 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0V5|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi1g1v0443100_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P0C7A6|BTBBB_DANRE Ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B; TrEMBL-Plants: tr|A0A151QR03|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0443100_LC | 5 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P05008|IFNAB_BOVIN Interferon alpha-B; TrEMBL-Plants: tr|A0A151U069|A0A151U069_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0513300_LC | 5 | ||
– | LINE-1 reverse transcriptase like; TAIR: ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein (ChrM); Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0570500_LC | 14 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8XE35|YFAS_ECO57 UPF0192 protein YfaS; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0621800_LC | 4 | ||
– | Transposon TX1 uncharacterized; TAIR: AT3G05850.1 MuDR family transposase; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151TKQ5|A0A151TKQ5_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi1g1v0638900_LC | 3 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G37900.1 Major facilitator superfamily protein; Swiss-Prot: sp|A5FDF9|HEM12_FLAJ1 Glutamyl-tRNA reductase 2; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0017500_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CA21|A5CA21_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0066000_LC | 9 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CA21|A5CA21_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0073200_LC | 7 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A1D5Y8Q5|A0A1D5Y8Q5_WHEAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0209600_LC | 4 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|J7G2Z7|J7G2Z7_ROSRU Non-ltr retroelement reverse transcriptase; Found in the gene: LotjaGi2g1v0213000_LC | 3 | ||
– | Retrotransposon protein, putative, unclassified, expressed; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q5RBU2|RM46_PONAB 39S ribosomal protein L46, mitochondrial; TrEMBL-Plants: tr|A0A1D5W0E6|A0A1D5W0E6_WHEAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0220900_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|A7MY11|Y3217_VIBCB UPF0294 protein VIBHAR_03217; TrEMBL-Plants: tr|A5AK27|A5AK27_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0253100 | 5 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi2g1v0424700_LC | 13 | ||
– | LINE-1 reverse transcriptase; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCM4|F4NCM4_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0108900_LC | 3 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q73XV0|SIR2_MYCPA Sulfite reductase [ferredoxin] 2; TrEMBL-Plants: tr|A0A151RWQ0|A0A151RWQ0_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi3g1v0123900_LC | 3 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151TFK9|A0A151TFK9_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi3g1v0137200_LC | 3 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151TFK9|A0A151TFK9_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi3g1v0161700_LC | 5 | ||
– | Retrotransposon protein, putative, unclassified; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P33334|PRP8_YEAST Pre-mRNA-splicing factor 8; TrEMBL-Plants: tr|B9SJP7|B9SJP7_RICCO Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0173400_LC | 5 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P51584|XYNY_CLOTM Endo-1,4-beta-xylanase Y; TrEMBL-Plants: tr|A0A151TIB7|A0A151TIB7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0255000_LC | 5 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151QR46|A0A151QR46_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi3g1v0557100_LC | 3 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|C5D5F6|NADA_GEOSW Quinolinate synthase A; TrEMBL-Plants: tr|A0A151R3M6|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0557100_LC | 6 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9D180|CFA57_MOUSE Cilia- and flagella-associated protein 57; TrEMBL-Plants: tr|A0A151TI35|A0A151TI35_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0094900_LC | 5 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|C3KDB8|HLDE_PSEFS Bifunctional protein HldE; TrEMBL-Plants: tr|A0A151QR46|A0A151QR46_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi4g1v0124500_LC | 5 | ||
– | Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151SNW0|A0A151SNW0_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi4g1v0133400_LC | 3 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi4g1v0170500_LC | 6 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G80460.1 Actin-like ATPase superfamily protein; Swiss-Prot: sp|A5V3W0|MIAA_SPHWW tRNA dimethylallyltransferase; TrEMBL-Plants: tr|A5C709|A5C709_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0174700_LC | 9 | ||
– | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P0CN91|ATG26_CRYNB Sterol 3-beta-glucosyltransferase; TrEMBL-Plants: tr|S8D7A1|S8D7A1_9LAMI Uncharacterized protein; Found in the gene: LotjaGi4g1v0243100_LC | 5 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CA21|A5CA21_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0259800_LC | 8 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0326700_LC | 12 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A1D5Y8Q5|A0A1D5Y8Q5_WHEAT Uncharacterized protein; Found in the gene: LotjaGi5g1v0024500_LC | 4 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P26905|DPPD_BACSU Dipeptide transport ATP-binding protein DppD; TrEMBL-Plants: tr|A0A151TI35|A0A151TI35_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0109800_LC | 6 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT3G19170.1 presequence protease 1; Swiss-Prot: sp|Q9LJL3|PREP1_ARATH Presequence protease 1, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2RIP2|A0A0B2RIP2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0110200_LC | 3 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P11531|DMD_MOUSE Dystrophin; TrEMBL-Plants: tr|A0A151RVK1|A0A151RVK1_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0122200_LC | 4 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151TFK9|A0A151TFK9_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0130800_LC | 12 | ||
– | LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219100_LC | 20 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219100_LC | 14 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi6g1v0079800_LC | 8 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9LHB1|FDM3_ARATH Factor of DNA methylation 3; TrEMBL-Plants: tr|Q2HUN6|Q2HUN6_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Found in the gene: LotjaGi6g1v0084200_LC | 4 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O14939|PLD2_HUMAN Phospholipase D2; TrEMBL-Plants: tr|A0A061DX02|A0A061DX02_THECC Uncharacterized protein; Found in the gene: LotjaGi6g1v0116000_LC | 5 | ||
– | Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RNE7|A0A151RNE7_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi6g1v0127000_LC | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
TRANSMEMBRANE | Phobius | 1 | 1.92 |