Domain Predictions — View

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PS50878

Source: ProSiteProfiles

Description

Reverse transcriptase (RT) catalytic domain profile.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 347

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0280159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyprotein [Glycine max] gi\|27764548\|gb\|AAO23078.1\|	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 PF00078 PS50878 PTHR24559 PTHR24559:SF186 SSF56672 cd01647	9
Lj0g3v0299629.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RNA-directed DNA polymerase [Pseudoalteromonas agarivorans] gi\|490727264\|ref\|WP_004589692.1\|	Domains IPR000477 PF00078 PS50878 PTHR19446 PTHR19446:SF391 SSF56672	6
Lj0g3v0351489.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Reverse transcriptase [Eleocharis acicularis] gi\|294864135\|gb\|ADF45968.1\|	Domains G3DSA:3.30.70.270 IPR000477 PF00078 PS50878 PTHR24559 PTHR24559:SF202 SSF56672	7
Lj3g3v0839410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: telomerase reverse transcriptase-like [Glycine max] gi\|356555309\|ref\|XP_003545976.1\|	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR003545 IPR021891 NON_CYTOPLASMIC_DOMAIN PF12009 PR01365 PS50878 PTHR12066 PTHR12066:SF0 SM00975 SSF56672 TRANSMEMBRANE cd01648	14
Lj3g3v0839410.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Telomerase reverse transcriptase [Populus trichocarpa] gi\|198075764\|gb\|ACH81294.1\|	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR003545 IPR021891 NON_CYTOPLASMIC_DOMAIN PF12009 PR01365 PS50878 PTHR12066 PTHR12066:SF0 SM00975 SSF56672 TRANSMEMBRANE cd01648	14
LotjaGi0g1v0001300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi0g1v0001300_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 cd01647 cd09274	14
LotjaGi0g1v0002500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi0g1v0002500_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 cd01647 cd09274	14
LotjaGi0g1v0002600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi0g1v0002700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi0g1v0002800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0012000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0012000_LC	Domains G3DSA:3.60.10.10 IPR000477 IPR026960 IPR036691 IPR043502 PF00078 PF13966 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 cd01650	13
LotjaGi1g1v0015200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0015200_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.60.10.10 IPR000477 IPR026960 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46890 SSF56219 SSF56672 TMhelix TRANSMEMBRANE cd01650	17
LotjaGi1g1v0048500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W0\|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	39
LotjaGi1g1v0048500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W0\|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	39
LotjaGi1g1v0065000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151T8F3\|A0A151T8F3_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0065000_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF309 SSF56672 cd01647	10
LotjaGi1g1v0100400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A0A151R3M6\|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi1g1v0100400_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672	6
LotjaGi1g1v0114000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol-polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0114000_LC	Domains G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	14
LotjaGi1g1v0129300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P09523\|POL_FMVD Enzymatic polyprotein; TrEMBL-Plants: tr\|A0A151R3E4\|A0A151R3E4_CAJCA Polyprotein; Found in the gene: LotjaGi1g1v0129300_LC	Domains G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR34072 PTHR34072:SF8 SSF56672 cd01647	14
LotjaGi1g1v0135000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P11369\|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A1D5U5S1\|A0A1D5U5S1_WHEAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0135000_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	7
LotjaGi1g1v0136100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151RBM5\|A0A151RBM5_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi1g1v0136100_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR021109 IPR043128 IPR043502 PF00078 PF08284 PS50878 PTHR24559 PTHR24559:SF288 SSF56672 cd00303 cd01647 mobidb-lite	16
LotjaGi1g1v0153100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151QR03\|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0153100_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR018117 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS00094 PS50878 PTHR46890 SSF56672 TRANSMEMBRANE	11
LotjaGi1g1v0153800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0153800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi1g1v0167300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A0A151U6Y2\|A0A151U6Y2_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0167300_LC	Domains Coil G3DSA:3.60.10.10 IPR000477 IPR036691 IPR043502 PF00078 PS50878 PTHR46890 SSF56219 SSF56672 cd01650	11
LotjaGi1g1v0169000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151U2G6\|A0A151U2G6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0169000_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647	11
LotjaGi1g1v0171400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A0B2R0V5\|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi1g1v0171400_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF13966 PS50878 PTHR46736 TRANSMEMBRANE	8
LotjaGi1g1v0177200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0V5\|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi1g1v0177200_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF3 SSF56672 TMhelix TRANSMEMBRANE cd01650	12
LotjaGi1g1v0184600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|Q03274\|PO22_POPJA Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0184600_LC	Domains IPR000477 PF00078 PS50878 PTHR46890	4
LotjaGi1g1v0206900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|F4NCF7\|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0206900_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.60.10.10 IPR000477 IPR005135 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF03372 PS50878 PTHR46890 SSF56219 SSF56672 TRANSMEMBRANE cd01650	16
LotjaGi1g1v0218200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0218200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0222000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0222000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0223100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon gypsy; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0223100_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF222 SSF56672 cd01647	13
LotjaGi1g1v0223500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0223500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0224800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0224800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0226200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0226200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0228200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0228200_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.60.10.10 IPR000477 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR33710 PTHR33710:SF9 SSF56219 SSF56672 TRANSMEMBRANE cd01650	14
LotjaGi1g1v0229200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0229200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0229300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A1B5Z8G7\|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0229300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi1g1v0243000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0243000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0281700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A1B5Z8G7\|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0281700_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041373 IPR041588 IPR043128 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF00098 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	45
LotjaGi1g1v0289700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-Pol polyprotein; TAIR: AT1G13610.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151R1B0\|A0A151R1B0_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0289700_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647	11
LotjaGi1g1v0310100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A5CAA2\|A5CAA2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0310100_LC	Domains G3DSA:3.60.10.10 IPR000477 IPR036691 IPR043502 PF00078 PS50878 PTHR46890 SSF56219 SSF56672 cd01650	10
LotjaGi1g1v0311100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0311100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR001969 IPR005162 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF03732 PF13975 PF17919 PF17921 PS00141 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	42
LotjaGi1g1v0320600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|F4NCF7\|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0320600_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TRANSMEMBRANE	9
LotjaGi1g1v0328400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein LINE-1; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A1D5SLU2\|A0A1D5SLU2_WHEAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0328400_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF4 TRANSMEMBRANE	8
LotjaGi1g1v0364900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A151RZ99\|A0A151RZ99_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi1g1v0364900_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	13
LotjaGi1g1v0372900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RPJ0\|A0A151RPJ0_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi1g1v0372900_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TMhelix TRANSMEMBRANE	10
LotjaGi1g1v0388900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q2HW87\|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0388900_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR021109 IPR043128 IPR043502 PF00078 PF08284 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd00303 cd01647	16
LotjaGi1g1v0401900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQT4\|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0401900_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi1g1v0443100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RPJ0\|A0A151RPJ0_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi1g1v0443100_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TRANSMEMBRANE cd01650	10
LotjaGi1g1v0570300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Reverse transcriptase; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|F4NCI7\|F4NCI7_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0570300_LC	Domains G3DSA:3.30.420.10 IPR000477 IPR002156 IPR012337 IPR026960 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13456 PF13966 PS50878 PTHR46736 PTHR46736:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 cd01650 cd06222	22
LotjaGi1g1v0570500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein (ChrM); Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0570500_LC	Domains Coil G3DSA:3.60.10.10 IPR000477 IPR005135 IPR036691 IPR043502 PF00078 PF03372 PS50878 PTHR33710 PTHR33710:SF9 SSF56219 SSF56672 cd01650	14
LotjaGi1g1v0571300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A151SR66\|A0A151SR66_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi1g1v0571300_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR19446 PTHR19446:SF429 TMhelix TRANSMEMBRANE	9
LotjaGi1g1v0622800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0622800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi1g1v0627300_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0627300_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.60.10.10 IPR000477 IPR005135 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF03372 PS50878 PTHR46890 PTHR46890:SF3 SSF158221 SSF56219 SSF56672 TRANSMEMBRANE cd01650	17
LotjaGi1g1v0638200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0V5\|A0A0B2R0V5_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi1g1v0638200_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 SSF56672 TRANSMEMBRANE cd01650	10
LotjaGi1g1v0781300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0781300_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.60.10.10 IPR000477 IPR026960 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 TRANSMEMBRANE cd01650	17
LotjaGi2g1v0003500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0003500_LC	Domains G3DSA:3.30.420.10 G3DSA:3.60.10.10 IPR000477 IPR002156 IPR026960 IPR036397 IPR036691 IPR043502 PF00078 PF13456 PF13966 PS50878 PS51257 PTHR46736 PTHR46736:SF3 SSF56219 SSF56672 cd01650 cd06222	19
LotjaGi2g1v0006500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A151RZ99\|A0A151RZ99_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi2g1v0006500_LC	Domains IPR000477 PF00078 PS50878 PTHR19446 PTHR19446:SF429	5
LotjaGi2g1v0016800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A0L9V4Z2\|A0A0L9V4Z2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0016800_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR005162 IPR021109 IPR041577 IPR043128 IPR043502 PF00078 PF03732 PF08284 PF17919 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647 cd09274 mobidb-lite	24
LotjaGi2g1v0016800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A0L9V4Z2\|A0A0L9V4Z2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0016800_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR005162 IPR021109 IPR041577 IPR043128 IPR043502 PF00078 PF03732 PF08284 PF17919 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647 cd09274 mobidb-lite	24
LotjaGi2g1v0020300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0020300_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR021109 IPR043128 IPR043502 PF00078 PF08284 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647	16
LotjaGi2g1v0078400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151TBE7\|A0A151TBE7_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0078400_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF309 SSF56672 cd01647	11
LotjaGi2g1v0078600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0078600_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF288 SSF56672 cd01647	11
LotjaGi2g1v0079500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151R8H2\|A0A151R8H2_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0079500_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi2g1v0087300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0087300_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.60.10.10 IPR000477 IPR026960 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 TMhelix TRANSMEMBRANE cd01650	18
LotjaGi2g1v0088300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A0A151SIK8\|A0A151SIK8_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0088300_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	7
LotjaGi2g1v0089800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0089800_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi2g1v0090800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0090800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0091500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0091500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0094200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0094200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0101900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0101900	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi2g1v0106400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q2HW87\|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR005162 IPR021109 IPR036875 IPR043128 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF00098 PF03732 PF08284 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 mobidb-lite	32
LotjaGi2g1v0108000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0108200_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 cd01647 cd09274	14
LotjaGi2g1v0108400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UF56\|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0108400_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi2g1v0108500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0109100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0109100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0110000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0110000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0111900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0111900_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi2g1v0112300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0112300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0112500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0112500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0113200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A0L9V4A1\|A0A0L9V4A1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0113200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi2g1v0113600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0113600	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274 mobidb-lite	23
LotjaGi2g1v0116300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0116300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi2g1v0130400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151SF42\|A0A151SF42_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0130400_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF3 SSF56672 TRANSMEMBRANE cd01650	11
LotjaGi2g1v0150100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon TX1 uncharacterized; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi2g1v0150100_LC	Domains IPR000477 PF00078 PS50878 PTHR46890 PTHR46890:SF2	5
LotjaGi2g1v0157700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi2g1v0157700_LC	Domains G3DSA:3.60.10.10 IPR000477 IPR026960 IPR036691 IPR043502 PF00078 PF13966 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 cd01650	13
LotjaGi2g1v0166900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase homolog; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|J7G2Z7\|J7G2Z7_ROSRU Non-ltr retroelement reverse transcriptase; Found in the gene: LotjaGi2g1v0166900_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 PTHR46890:SF4 SSF56672 cd01650	8
LotjaGi2g1v0179900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P92523\|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0179900_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672	9
LotjaGi2g1v0184500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi2g1v0184500_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TRANSMEMBRANE	9
LotjaGi2g1v0202500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151R3M6\|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi2g1v0202500_LC	Domains G3DSA:3.30.420.10 G3DSA:3.60.10.10 IPR000477 IPR002156 IPR012337 IPR026960 IPR036397 IPR036691 IPR043502 PF00078 PF13456 PF13966 PS50878 PS50879 PTHR46890 SSF53098 SSF56219 SSF56672 cd01650 cd06222	20
LotjaGi2g1v0204500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0204500_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR33116 PTHR33116:SF20 TRANSMEMBRANE	10
LotjaGi2g1v0215900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Reverse transcriptase; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|F4NCJ4\|F4NCJ4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0215900_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR002156 IPR026960 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13456 PF13966 PS50878 PTHR46736 SSF56672 TRANSMEMBRANE cd01650 cd06222	15
LotjaGi2g1v0218800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0218800_LC	Domains Coil G3DSA:3.60.10.10 IPR000477 IPR026960 IPR036691 PF00078 PF13966 PS50878 PTHR46890 SSF56219 cd01650	11
LotjaGi2g1v0218800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151QR03\|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0218800_LC	Domains IPR000477 IPR026960 PF13966 PS50878 PTHR36617	5
LotjaGi2g1v0290700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase-like protein; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P16423\|POLR_DROME Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM; TrEMBL-Plants: tr\|Q2HUN6\|Q2HUN6_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Found in the gene: LotjaGi2g1v0290700_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 SSF56672 TRANSMEMBRANE	9
LotjaGi2g1v0341800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A061EEM4\|A0A061EEM4_THECC Retrotransposon protein, putative; Found in the gene: LotjaGi2g1v0341800_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF17917 PF17921 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647 cd09274	18
LotjaGi2g1v0357900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0357900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0358000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UH18\|A0A151UH18_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0358000_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi2g1v0361000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0361000_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF288 SSF56672 cd01647	11
LotjaGi2g1v0374800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0374800_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR33116 PTHR33116:SF33 TMhelix TRANSMEMBRANE	9
LotjaGi2g1v0461000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151QR03\|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0461000_LC	Domains IPR000477 PS50878 PTHR33116 PTHR33116:SF33	4
LotjaGi2g1v0461000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0461000_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 PTHR46890:SF3 SSF56672	7
LotjaGi3g1v0003400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151SJB1\|A0A151SJB1_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0003400_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TMhelix TRANSMEMBRANE	10
LotjaGi3g1v0052400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RPJ0\|A0A151RPJ0_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi3g1v0052400_LC	Domains IPR000477 IPR026960 PF00078 PF13966 PS50878 PTHR46736	6
LotjaGi3g1v0123100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Telomerase reverse transcriptase; TAIR: AT5G16850.1 telomerase reverse transcriptase; Swiss-Prot: sp\|Q9SPU7\|TERT_ARATH Telomerase reverse transcriptase; TrEMBL-Plants: tr\|V7BV12\|V7BV12_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0123100	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.132.70 IPR000477 IPR003545 IPR021891 IPR043502 NON_CYTOPLASMIC_DOMAIN PF12009 PR01365 PS50878 PTHR12066 SM00975 SSF56672 TRANSMEMBRANE cd01648	15
LotjaGi3g1v0130100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase homolog; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A0J8B9Y6\|A0A0J8B9Y6_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0130100_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR33116 PTHR33116:SF24 SSF56672	7
LotjaGi3g1v0145100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|F4NCJ4\|F4NCJ4_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0145100_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR002156 IPR026960 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13456 PF13966 PS50878 PTHR46736 SSF56672 TRANSMEMBRANE cd01650 cd06222	15
LotjaGi3g1v0161700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi3g1v0161700_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46890 PTHR46890:SF3 SSF56672 TRANSMEMBRANE cd01650	13
LotjaGi3g1v0166900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon gypsy; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P10401\|POLY_DROME Retrovirus-related Pol polyprotein from transposon gypsy; TrEMBL-Plants: tr\|M5XJ91\|M5XJ91_PRUPE Uncharacterized protein; Found in the gene: LotjaGi3g1v0166900_LC	Domains G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR012337 IPR036397 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647	14
LotjaGi3g1v0167800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0167800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	39
LotjaGi3g1v0174500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|F4NCF7\|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0174500_LC	Domains Coil IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	8
LotjaGi3g1v0211500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi3g1v0211500_LC	Domains IPR000477 IPR026960 PF13966 PS50878 PTHR46736	5
LotjaGi3g1v0211500_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi3g1v0211500_LC	Domains IPR000477 IPR026960 PF13966 PS50878 PTHR46736	5
LotjaGi3g1v0229400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|F4NCK9\|F4NCK9_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0229400_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 SSF56672 TRANSMEMBRANE	9
LotjaGi3g1v0234100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi3g1v0234100_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TRANSMEMBRANE cd01650	10
LotjaGi3g1v0238300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi3g1v0238300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi3g1v0238800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase homolog; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A0J8BAS0\|A0A0J8BAS0_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0238800_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 PTHR46890:SF4 SSF56672	7
LotjaGi3g1v0258400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0258400_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi3g1v0261800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|Q05118\|PO23_POPJA Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2; TrEMBL-Plants: tr\|A5B0H7\|A5B0H7_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0261800_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672	6
LotjaGi3g1v0264800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0264800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0264900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0264900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UF56\|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0265900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	18
LotjaGi3g1v0266100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0266800_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF222 SSF56672 cd01647	10
LotjaGi3g1v0266900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0268400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0268400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0268800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0268800	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0270300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0270300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0271100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon opus; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151SJ80\|A0A151SJ80_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0271100_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PS50878 PTHR24559 PTHR24559:SF256 SSF56672	8
LotjaGi3g1v0271300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0271300_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 cd01647 cd09274	14
LotjaGi3g1v0272300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0272300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0272400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0272400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0272900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0272900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0273100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0273100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0273300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0273300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0273800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0273800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0274200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0274200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0274300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0274300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0275100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0275100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0277000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0277000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0278700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0278700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0289100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151UCE7\|A0A151UCE7_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0289100_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF309 SSF56672 cd01647	10
LotjaGi3g1v0293400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0293400_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR45643 SSF56672 cd01647	12
LotjaGi3g1v0293400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0293400_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR45643 SSF56672 cd01647	12
LotjaGi3g1v0306700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0306700_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR001969 IPR005162 IPR021109 IPR036875 IPR041373 IPR043128 IPR043502 PF00078 PF00098 PF03732 PF08284 PF17917 PS00141 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	32
LotjaGi3g1v0307200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi3g1v0307200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi3g1v0307200_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi3g1v0326800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|F4NCF7\|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0326800_LC	Domains G3DSA:3.30.420.10 G3DSA:3.60.10.10 IPR000477 IPR002156 IPR005135 IPR012337 IPR026960 IPR036397 IPR036691 IPR043502 PF00078 PF03372 PF13456 PF13966 PS50878 PS50879 PTHR46890 SSF53098 SSF56219 SSF56672 cd01650 cd06222	22
LotjaGi3g1v0334000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi3g1v0334000_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46890 TMhelix TRANSMEMBRANE cd01650	11
LotjaGi3g1v0349300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P18929\|NU1M_DROME NADH-ubiquinone oxidoreductase chain 1; TrEMBL-Plants: tr\|A0A151S011\|A0A151S011_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0349300_LC	Domains IPR000477 PS50878	2
LotjaGi3g1v0373300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0373300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0391900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0391900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	13
LotjaGi3g1v0423100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi3g1v0423100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi3g1v0434200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151R3M6\|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0434200_LC	Domains G3DSA:3.30.420.10 G3DSA:3.60.10.10 IPR000477 IPR002156 IPR012337 IPR026960 IPR036397 IPR036691 IPR043502 PF00078 PF13456 PF13966 PS50878 PS50879 PTHR46736 SSF53098 SSF56219 SSF56672 cd01650 cd06222	20
LotjaGi3g1v0451500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q91DM0\|POLG_PVCV1 Genome polyprotein; TrEMBL-Plants: tr\|A0A151RSL0\|A0A151RSL0_CAJCA Polyprotein; Found in the gene: LotjaGi3g1v0451500_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR34072 PTHR34072:SF8 SSF56672 cd01647	11
LotjaGi3g1v0451500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q91DM0\|POLG_PVCV1 Genome polyprotein; TrEMBL-Plants: tr\|A0A151RSL0\|A0A151RSL0_CAJCA Polyprotein; Found in the gene: LotjaGi3g1v0451500_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR34072 PTHR34072:SF8 SSF56672 cd01647	11
LotjaGi3g1v0451500_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q91DM0\|POLG_PVCV1 Genome polyprotein; TrEMBL-Plants: tr\|A0A151RSL0\|A0A151RSL0_CAJCA Polyprotein; Found in the gene: LotjaGi3g1v0451500_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR34072 PTHR34072:SF8 SSF56672 cd01647	11
LotjaGi3g1v0456900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P11369\|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0456900_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.420.10 IPR000477 IPR002156 IPR012337 IPR026960 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13456 PF13966 PS50878 PTHR46736 PTHR46736:SF3 SSF53098 SSF56672 TRANSMEMBRANE cd01650 cd06222	21
LotjaGi3g1v0463700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi3g1v0463700_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR33116 PTHR33116:SF30 SSF56672 TRANSMEMBRANE cd01650	13
LotjaGi4g1v0044600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151RHD2\|A0A151RHD2_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0044600_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041373 IPR043128 IPR043502 PF00078 PF17917 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647 cd09274	14
LotjaGi4g1v0058200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0058200_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 PTHR46890:SF4 SSF56672	7
LotjaGi4g1v0079700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151U7C4\|A0A151U7C4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0079700_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647	10
LotjaGi4g1v0104300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0104300_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 TRANSMEMBRANE cd01650	8
LotjaGi4g1v0107900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0107900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0123500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0123500_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF222 SSF56672 cd01647	10
LotjaGi4g1v0125300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi4g1v0125300_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR001969 IPR005162 IPR021109 IPR043128 IPR043502 PF00078 PF03732 PF08284 PS00141 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647 mobidb-lite	21
LotjaGi4g1v0126700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0126700_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF4 SSF56672 TRANSMEMBRANE	10
LotjaGi4g1v0133400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein LINE-1; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151SRU5\|A0A151SRU5_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi4g1v0133400_LC	Domains IPR000477 PF00078 PS50878 PTHR46890 PTHR46890:SF4	5
LotjaGi4g1v0142100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase-like protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|Q2QQV8\|Q2QQV8_ORYSJ Retrotransposon protein, putative, unclassified; Found in the gene: LotjaGi4g1v0142100_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	7
LotjaGi4g1v0159700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A0A151RZR6\|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0159700_LC	Domains G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF50630 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi4g1v0163400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0163400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0167800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0167800_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi4g1v0171300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0171300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi4g1v0171800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0171800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0175000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0175000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0175600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0175600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0175900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0175900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0176000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0176000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0176300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0176300_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647	10
LotjaGi4g1v0176900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0176900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi4g1v0179000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UH18\|A0A151UH18_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0179700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0180300_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR45643 SSF56672 cd01647 mobidb-lite	10
LotjaGi4g1v0180700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0181000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0181000_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF222 SSF56672 cd01647	10
LotjaGi4g1v0181200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0181200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0181300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0181300_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF222 SSF56672 cd01647	10
LotjaGi4g1v0181400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0181400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0181500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0181500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0182000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0182000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0182100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0182100_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 cd01647 cd09274	14
LotjaGi4g1v0182600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0182600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0182800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0182800_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 cd01647 cd09274	14
LotjaGi4g1v0182900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0182900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0183000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0183000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0183200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0183200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0183400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UF56\|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0183400_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 TMhelix TRANSMEMBRANE cd01647 cd09274	18
LotjaGi4g1v0183800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0183800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0184200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0184200_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	7
LotjaGi4g1v0184900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0184900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0185500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0185500_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	24
LotjaGi4g1v0185500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0185500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi4g1v0198300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A5ADI2\|A5ADI2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0198300_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF3 SSF56672 TRANSMEMBRANE	10
LotjaGi4g1v0205400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag/pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A0A151R4E2\|A0A151R4E2_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0205400_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR45643 SSF56672 cd01647	10
LotjaGi4g1v0213500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W0\|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0213500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SM00298 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979	40
LotjaGi4g1v0243500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151QR03\|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi4g1v0243500_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR018117 NON_CYTOPLASMIC_DOMAIN PF00078 PS00094 PS50878 PTHR36617 TMhelix TRANSMEMBRANE	10
LotjaGi4g1v0261200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q3C0I2\|Q3C0I2_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0261200_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR021109 IPR043128 IPR043502 PF00078 PF08284 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647	16
LotjaGi4g1v0285100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase isogeny; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A5BP90\|A5BP90_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0285100_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672	6
LotjaGi4g1v0289700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W4\|B5U9W4_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0289700_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF288 SSF56672 cd01647	11
LotjaGi4g1v0292400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi4g1v0292400_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR001969 IPR021109 IPR043128 IPR043502 PF00078 PF08284 PS00141 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647	18
LotjaGi4g1v0292700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase homolog; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P11369\|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0J8BAS0\|A0A0J8BAS0_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0292700_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 PTHR46890:SF4 SSF56672 cd01650	8
LotjaGi4g1v0293300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0293300_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	7
LotjaGi4g1v0368100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi4g1v0368100_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR001969 IPR005162 IPR021109 IPR041577 IPR043128 IPR043502 PF00078 PF03732 PF08284 PF17919 PS00141 PS50878 PTHR24559 PTHR24559:SF288 SSF50630 SSF56672 cd00303 cd01647 mobidb-lite	25
LotjaGi4g1v0375700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0375700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274 mobidb-lite	23
LotjaGi5g1v0073400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|Q2HUN6\|Q2HUN6_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Found in the gene: LotjaGi5g1v0073400_LC	Domains G3DSA:3.60.10.10 IPR000477 IPR005135 IPR036691 IPR043502 PF00078 PF03372 PS50878 PTHR46890 SSF56219 SSF56672 cd01650	12
LotjaGi5g1v0082100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151U7M3\|A0A151U7M3_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi5g1v0082100_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041373 IPR043128 IPR043502 PF00078 PF17917 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647 cd09274	14
LotjaGi5g1v0096700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0096700_LC	Domains G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0120100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0120100_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.420.10 IPR000477 IPR002156 IPR026960 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF13456 PF13966 PS50878 PTHR46736 PTHR46736:SF3 SSF56672 TRANSMEMBRANE cd01650 cd06222	18
LotjaGi5g1v0120800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RI96\|A0A151RI96_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi5g1v0120800_LC	Domains G3DSA:3.30.420.10 IPR000477 IPR002156 IPR012337 IPR026960 IPR036397 IPR043502 PF00078 PF13456 PF13966 PS50878 PTHR46736 SSF53098 SSF56672 cd01650 cd06222	16
LotjaGi5g1v0121900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0121900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0124600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0124600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0124700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0124700	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi5g1v0125900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0125900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0127500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0127600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0127900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UF56\|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0128200_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF56672 TMhelix TRANSMEMBRANE cd01647 cd09274	18
LotjaGi5g1v0128300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151R7Z9\|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0128600_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672 cd01647	10
LotjaGi5g1v0128700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129400	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129900	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0130000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0130000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0131200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0131200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0132300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0132300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0133200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0133200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0134500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0134500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0142000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0142000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0143700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0143700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0150900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W1\|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150900_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SM00298 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	41
LotjaGi5g1v0166000_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RZR6\|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0166000_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd01647 cd09274	27
LotjaGi5g1v0172000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A061G943\|A0A061G943_THECC Uncharacterized protein; Found in the gene: LotjaGi5g1v0172000_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi5g1v0181100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UF56\|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0181100_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	18
LotjaGi5g1v0208900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0208900_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.60.10.10 IPR000477 IPR005135 IPR026960 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF03372 PF13966 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 TRANSMEMBRANE cd01650	19
LotjaGi5g1v0219100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|F4NCI4\|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219100_LC	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.60.10.10 IPR000477 IPR005135 IPR026960 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF03372 PF13966 PS50878 PTHR33710 PTHR33710:SF9 SSF56219 SSF56672 TMhelix TRANSMEMBRANE cd01650	20
LotjaGi5g1v0277700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0277700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0283400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0283400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0293200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0293200_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 SSF56672 TRANSMEMBRANE cd01650	10
LotjaGi5g1v0308300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0308300_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR026960 NON_CYTOPLASMIC_DOMAIN PF00078 PF13966 PS50878 PTHR46736 TRANSMEMBRANE	9
LotjaGi5g1v0309300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RNA-directed DNA polymerase (Reverse transcriptase); TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|M5XSK0\|M5XSK0_PRUPE Uncharacterized protein; Found in the gene: LotjaGi5g1v0309300_LC	Domains G3DSA:3.30.420.10 IPR000477 IPR002156 IPR012337 IPR026960 IPR036397 IPR043502 PF00078 PF13456 PF13966 PS50878 PTHR46736 PTHR46736:SF3 SSF53098 SSF56672 cd01650 cd06222 mobidb-lite	18
LotjaGi5g1v0343500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi5g1v0343500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi6g1v0037100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P08548\|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr\|A0A151TWC5\|A0A151TWC5_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi6g1v0037100_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR46890 PTHR46890:SF3 SSF56672 TRANSMEMBRANE	10
LotjaGi6g1v0039500_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151RYW3\|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi6g1v0039500_LC	Domains Coil G3DSA:3.60.10.10 IPR000477 IPR036691 IPR043502 PF00078 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 cd01650	12
LotjaGi6g1v0063200_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q8I7P9\|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi6g1v0063200_LC	Domains G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF300 SSF56672 cd01647	14
LotjaGi6g1v0063800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase-like protein; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp\|P92555\|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250; TrEMBL-Plants: tr\|A0A151QZE4\|A0A151QZE4_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi6g1v0063800_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672	6
LotjaGi6g1v0065300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0065300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0065500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151SAS8\|A0A151SAS8_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0065500_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF300 SSF56672 cd01647	10
LotjaGi6g1v0098300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P92523\|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr\|Q3C0I2\|Q3C0I2_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0098300_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF269 SSF56672	9
LotjaGi6g1v0103300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0103300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0107800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0107800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0110500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151U7M3\|A0A151U7M3_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0110500_LC	Domains G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF295 SSF56672 cd01647	10
LotjaGi6g1v0115500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0115500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0115900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0115900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0116300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0116300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0116600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0116600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0123600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0123600_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi6g1v0125300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0125300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0125700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0125700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0125800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0125800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0127300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0127300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi6g1v0130000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0130000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0130700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0130700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0142200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151RWQ0\|A0A151RWQ0_CAJCA LINE-1 reverse transcriptase isogeny; Found in the gene: LotjaGi6g1v0142200_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR33116 PTHR33116:SF24 SSF56672 cd01650	8
LotjaGi6g1v0147000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0147000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0158200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A0J8BAS0\|A0A0J8BAS0_BETVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0158200_LC	Domains IPR000477 PF00078 PS50878 PTHR46890	4
LotjaGi6g1v0160400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi6g1v0160400_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.60.10.10 IPR000477 IPR005135 IPR020847 IPR026960 IPR036691 NON_CYTOPLASMIC_DOMAIN PF00078 PF03372 PF13966 PS00726 PS50878 PTHR46890 SSF56219 TRANSMEMBRANE cd01650	17
LotjaGi6g1v0191000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp\|O00370\|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr\|A0A0B2R0Q2\|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi6g1v0191000_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.60.10.10 IPR000477 IPR005135 IPR036691 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF03372 PS50878 PTHR46890 PTHR46890:SF3 SSF56219 SSF56672 TMhelix TRANSMEMBRANE cd01650	17
LotjaGi6g1v0214100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151TQZ3\|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR001969 IPR005162 IPR021109 IPR036875 IPR043128 IPR043502 PF00078 PF00098 PF03732 PF08284 PS00141 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 cd06503 mobidb-lite	30
LotjaGi6g1v0214100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151TQZ3\|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR001969 IPR005162 IPR021109 IPR036875 IPR043128 IPR043502 PF00078 PF00098 PF03732 PF08284 PS00141 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 cd06503 mobidb-lite	30
LotjaGi6g1v0214100_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein LINE-1; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|A0A151U6Y2\|A0A151U6Y2_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi6g1v0214900_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672 cd01650	7
LotjaGi6g1v0218100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0259700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp\|P0C2F6\|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr\|A0A151QR03\|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi6g1v0259700_LC	Domains CYTOPLASMIC_DOMAIN IPR000477 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PS50878 PTHR33116 PTHR33116:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56672 TMhelix TRANSMEMBRANE	15
LotjaGi6g1v0263900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LINE-1 reverse transcriptase like; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp\|P14381\|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr\|F4NCJ8\|F4NCJ8_BETVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0263900_LC	Domains IPR000477 IPR043502 PF00078 PS50878 PTHR46890 SSF56672	6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF56672	SUPERFAMILY	1	0.29