Domain Predictions — View

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cd02257

Source: CDD

Description

Peptidase_C19

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0449000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin carboxyl-terminal hydrolase-related protein isoform 1 [Theobroma cacao] gi\|508774427\|gb\|EOY21683.1\|	Domains Coil IPR001394 IPR006865 IPR028889 PF00443 PF04780 PS50235 PTHR22975 PTHR22975:SF9 SSF54001 cd02257 mobidb-lite	12
Lj1g3v0449000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	At3g47900 [Arabidopsis thaliana] gi\|119360023\|gb\|ABL66740.1\|	Domains IPR001394 IPR028889 PF00443 PS50235 PTHR22975 PTHR22975:SF9 SSF54001 cd02257	8
Lj1g3v0449000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin carboxyl-terminal hydrolase-related protein isoform 1 [Theobroma cacao] gi\|508774427\|gb\|EOY21683.1\|	Domains Coil IPR001394 IPR006865 IPR028889 PF00443 PF04780 PS50235 PTHR22975 PTHR22975:SF9 SSF54001 cd02257 mobidb-lite	12
Lj4g3v1601430.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin carboxyl-terminal hydrolase-related protein isoform 1 [Theobroma cacao] gi\|508774427\|gb\|EOY21683.1\|	Domains IPR001394 IPR028889 PF00443 PS50235 PTHR22975 PTHR22975:SF9 SSF54001 cd02257 mobidb-lite	9
LotjaGi1g1v0187900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G47890.1 Ubiquitin carboxyl-terminal hydrolase-related protein; Swiss-Prot: sp\|Q8BL06\|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54; TrEMBL-Plants: tr\|A0A1J7HY86\|A0A1J7HY86_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187900	Domains Coil G3DSA:1.25.40.10 G3DSA:3.90.70.10 IPR001394 IPR006865 IPR006866 IPR011990 IPR028889 IPR038765 PF00443 PF04780 PF04781 PS50235 PTHR22975 PTHR22975:SF21 SSF54001 cd02257 mobidb-lite	18
LotjaGi4g1v0244800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G47890.1 Ubiquitin carboxyl-terminal hydrolase-related protein; Swiss-Prot: sp\|Q8BL06\|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54; TrEMBL-Plants: tr\|V7CDI7\|V7CDI7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0244800	Domains Coil G3DSA:3.90.70.10 IPR001394 IPR006865 IPR006866 IPR028889 IPR038765 PF00443 PF04780 PF04781 PS50235 PTHR22975 PTHR22975:SF21 SSF54001 SignalP-TM cd02257 mobidb-lite	17
LotjaGi4g1v0244800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G47890.1 Ubiquitin carboxyl-terminal hydrolase-related protein; Swiss-Prot: sp\|Q8BL06\|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54; TrEMBL-Plants: tr\|V7CDI7\|V7CDI7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0244800	Domains Coil G3DSA:3.90.70.10 IPR001394 IPR006865 IPR006866 IPR028889 IPR038765 PF00443 PF04780 PF04781 PS50235 PTHR22975 PTHR22975:SF21 SSF54001 SignalP-TM cd02257 mobidb-lite	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29