Domain Predictions — View

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cd05162

Source: CDD

Description

PWWP

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0166999.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase NSD2-like isoform X1 [Cicer arietinum] gi\|502090535\|ref\|XP_004489260.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF77 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj0g3v0173129.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase ATM [Medicago truncatula] gi\|357440855\|ref\|XP_003590705.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF73 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj0g3v0339729.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase ATM [Medicago truncatula] gi\|357440855\|ref\|XP_003590705.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF73 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj0g3v0339729.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase ATM [Medicago truncatula] gi\|357440855\|ref\|XP_003590705.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF73 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj1g3v3642070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase NSD2-like isoform X1 [Cicer arietinum] gi\|502090535\|ref\|XP_004489260.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF77 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj1g3v4921070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: microtubule-associated protein futsch-like [Cicer arietinum] gi\|502113298\|ref\|XP_004494605.1\|	Domains Coil G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR10688 PTHR10688:SF1 SM00293 SSF63748 cd05162 mobidb-lite	11
Lj2g3v0970440.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase NSD2-like isoform X1 [Cicer arietinum] gi\|502090535\|ref\|XP_004489260.1\|	Domains G3DSA:2.30.30.160 G3DSA:3.30.70.330 IPR000313 IPR012677 PF00855 PS50812 PTHR22981 PTHR22981:SF77 SM00293 SSF63748 cd05162 mobidb-lite	12
Lj5g3v0616320.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula] gi\|357455297\|ref\|XP_003597929.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF71 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj5g3v1496780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA (cytosine-5)-methyltransferase 3A [Medicago truncatula] gi\|357511943\|ref\|XP_003626260.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR10688 PTHR10688:SF1 SM00293 SSF63748 cd05162 mobidb-lite	10
Lj6g3v0184180.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase ATM [Medicago truncatula] gi\|357440855\|ref\|XP_003590705.1\|	Domains G3DSA:2.30.30.160 IPR000313 PF00855 PS50812 PTHR22981 PTHR22981:SF73 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi1g1v0608200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G27860.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A0B2SET0\|A0A0B2SET0_GLYSO Serine/threonine-protein kinase ATM; Found in the gene: LotjaGi1g1v0608200	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR42851 PTHR42851:SF12 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi1g1v0771800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PWWP domain-containing family protein; TAIR: AT5G27650.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|A4FUF0\|GLYR1_BOVIN Putative oxidoreductase GLYR1; TrEMBL-Plants: tr\|K7MZX8\|K7MZX8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0771800	Domains Coil G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR10688 PTHR10688:SF5 SM00293 SSF63748 cd05162 mobidb-lite	11
LotjaGi2g1v0244700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G27860.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|K7MFP9\|K7MFP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244700	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR42851 PTHR42851:SF12 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi5g1v0074800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G09670.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A1J7GM74\|A0A1J7GM74_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0074800	Domains G3DSA:2.30.30.140 IPR000313 IPR035979 PF00855 PS50812 PTHR42851 PTHR42851:SF4 SM00293 SSF54928 SSF63748 cd05162 mobidb-lite	12
LotjaGi5g1v0074800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G09670.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A1J7GM74\|A0A1J7GM74_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0074800	Domains G3DSA:2.30.30.140 IPR000313 IPR035979 PF00855 PS50812 PTHR42851 PTHR42851:SF4 SM00293 SSF54928 SSF63748 cd05162 mobidb-lite	12
LotjaGi5g1v0074800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT5G02950.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A1J7GM74\|A0A1J7GM74_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0074800	Domains G3DSA:2.30.30.140 IPR000313 IPR035979 PF00855 PS50812 PTHR42851 PTHR42851:SF4 SM00293 SSF54928 SSF63748 cd05162 mobidb-lite	12
LotjaGi5g1v0161100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G09670.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A151T176\|A0A151T176_CAJCA Serine/threonine-protein kinase ATM; Found in the gene: LotjaGi5g1v0161100_LC	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR42851 PTHR42851:SF11 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi5g1v0222500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PWWP domain-containing family protein; TAIR: AT3G05430.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|K7N598\|K7N598_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0222500	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR10688 PTHR10688:SF5 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi5g1v0222600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PWWP domain-containing family protein; TAIR: AT3G05430.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|K7N598\|K7N598_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0222600	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR10688 PTHR10688:SF5 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi6g1v0019400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G09670.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A0S3STR8\|A0A0S3STR8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0019400	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR42851 PTHR42851:SF14 SM00293 SSF63748 cd05162 mobidb-lite	10
LotjaGi6g1v0019400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine-protein kinase ATM; TAIR: AT3G09670.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp\|Q9M3G7\|ATM_ARATH Serine/threonine-protein kinase ATM; TrEMBL-Plants: tr\|A0A0S3STR8\|A0A0S3STR8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0019400	Domains G3DSA:2.30.30.140 IPR000313 PF00855 PS50812 PTHR42851 PTHR42851:SF14 SM00293 SSF63748 cd05162 mobidb-lite	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	4.76