Domain Predictions — View

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cd06089

Source: CDD

Description

KOW_RPL26

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0164819.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S ribosomal protein L26-1-like [Glycine max] gi\|356555056\|ref\|XP_003545855.1\|	Domains G3DSA:2.30.30.30 IPR005756 IPR005824 IPR005825 IPR008991 IPR014722 PF00467 PF16906 PS01108 PTHR11143 SM00739 SSF50104 TIGR01080 cd06089 mobidb-lite	15
Lj0g3v0272389.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 50S ribosomal protein L24, chloroplastic-like [Cicer arietinum] gi\|502083995\|ref\|XP_004487627.1\|	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 MF_01326_B NON_CYTOPLASMIC_DOMAIN PF00467 PF17136 PS01108 PTHR12903 PTHR12903:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00739 SSF50104 TIGR01079 cd06089	21
Lj1g3v3028300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 50S ribosomal protein L24-like isoform X1 [Cicer arietinum] gi\|502082834\|ref\|XP_004487287.1\|	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 MF_01326_B PF00467 PF17136 PS01108 PTHR12903 SM00739 SSF50104 TIGR01079 cd06089	15
Lj2g3v1968310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation protein SH3-like family protein [Theobroma cacao] gi\|508717912\|gb\|EOY09809.1\|	Domains G3DSA:2.30.30.30 IPR005756 IPR005824 IPR005825 IPR008991 IPR014722 MF_01326_A PF00467 PF16906 PS01108 PTHR11143 SM00739 SSF50104 SignalP-TM_GRAM_POSITIVE TIGR01080 cd06089 mobidb-lite	17
Lj4g3v2313650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	KOW domain-containing protein [Arabidopsis lyrata subsp]. lyrata] gi\|297821761\|ref\|XP_002878763.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.30.30 IPR008991 IPR014722 NON_CYTOPLASMIC_DOMAIN SSF50104 TMhelix TRANSMEMBRANE cd06089	9
LotjaGi1g1v0516200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp\|Q47LK4\|RL24_THEFY 50S ribosomal protein L24; TrEMBL-Plants: tr\|I3S275\|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0516200	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_B PF00467 PF17136 PS01108 PTHR12903 SM00739 SSF50104 TIGR01079 cd06089	16
LotjaGi1g1v0516200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp\|Q47LK4\|RL24_THEFY 50S ribosomal protein L24; TrEMBL-Plants: tr\|I3S275\|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0516200	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_B PF00467 PF17136 PS01108 PTHR12903 SM00739 SSF50104 TIGR01079 cd06089	16
LotjaGi2g1v0246000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L26; TAIR: AT3G49910.1 Translation protein SH3-like family protein; Swiss-Prot: sp\|P51414\|RL261_ARATH 60S ribosomal protein L26-1; TrEMBL-Plants: tr\|A0A151T7I3\|A0A151T7I3_CAJCA 60S ribosomal protein L26-1; Found in the gene: LotjaGi2g1v0246000_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.30.30 IPR005756 IPR008991 IPR014722 IPR041988 NON_CYTOPLASMIC_DOMAIN PF16906 PTHR11143 PTHR11143:SF16 SSF50104 TIGR01080 TRANSMEMBRANE cd06089	14
LotjaGi2g1v0409300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosomal protein L24; TAIR: AT3G49910.1 Translation protein SH3-like family protein; Swiss-Prot: sp\|P51414\|RL261_ARATH 60S ribosomal protein L26-1; TrEMBL-Plants: tr\|I3SSN9\|I3SSN9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0409300	Domains G3DSA:2.30.30.30 IPR005756 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_A PF00467 PF16906 PS01108 PTHR11143 PTHR11143:SF16 SM00739 SSF50104 SignalP-TM TIGR01080 cd06089 mobidb-lite	19
LotjaGi3g1v0233600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal L24-like protein; TAIR: AT5G54600.1 Translation protein SH3-like family protein; Swiss-Prot: sp\|P11893\|RK24_PEA 50S ribosomal protein L24, chloroplastic; TrEMBL-Plants: tr\|C6T0A2\|C6T0A2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0233600	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_B NON_CYTOPLASMIC_DOMAIN PF00467 PF17136 PS01108 PTHR12903 PTHR12903:SF8 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00739 SSF50104 TIGR01079 cd06089	22
LotjaGi4g1v0340400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp\|A5VLJ4\|RL24_LACRD 50S ribosomal protein L24; TrEMBL-Plants: tr\|A0A0D3E1K4\|A0A0D3E1K4_BRAOL Uncharacterized protein; Found in the gene: LotjaGi4g1v0340400_LC	Domains G3DSA:2.30.30.30 IPR008991 IPR014722 IPR041988 SSF50104 cd06089	6
LotjaGi5g1v0169700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp\|A9VP88\|RL24_BACWK 50S ribosomal protein L24; TrEMBL-Plants: tr\|I3S275\|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0169700	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_B PF00467 PF17136 PS01108 PTHR12903 SM00739 SSF50104 TIGR01079 cd06089	16
LotjaGi5g1v0169700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L24; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp\|A9VP88\|RL24_BACWK 50S ribosomal protein L24; TrEMBL-Plants: tr\|I3S275\|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0169700	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_B PF00467 PF17136 PS01108 PTHR12903 SM00739 SSF50104 TIGR01079 cd06089	16
LotjaGi5g1v0169700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal L24-like protein; TAIR: AT5G23535.1 KOW domain-containing protein; Swiss-Prot: sp\|A9VP88\|RL24_BACWK 50S ribosomal protein L24; TrEMBL-Plants: tr\|I3S275\|I3S275_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0169700	Domains G3DSA:2.30.30.30 IPR003256 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_B PF00467 PF17136 PS01108 PTHR12903 SM00739 SSF50104 TIGR01079 cd06089	16
LotjaGi6g1v0337500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L26, putative; TAIR: AT3G49910.1 Translation protein SH3-like family protein; Swiss-Prot: sp\|P51414\|RL261_ARATH 60S ribosomal protein L26-1; TrEMBL-Plants: tr\|A0A151T7I3\|A0A151T7I3_CAJCA 60S ribosomal protein L26-1; Found in the gene: LotjaGi6g1v0337500	Domains G3DSA:2.30.30.30 IPR005756 IPR005824 IPR005825 IPR008991 IPR014722 IPR041988 MF_01326_A PF00467 PF16906 PS01108 PTHR11143 PTHR11143:SF16 SM00739 SSF50104 SignalP-TM TIGR01080 cd06089 mobidb-lite	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	6.67