Domain Predictions — View

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cd10422

Source: CDD

Description

RNase_Ire1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1589600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: serine/threonine-protein kinase ppk4-like [Cicer arietinum] gi\|502161785\|ref\|XP_004512283.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:2.140.10.10 G3DSA:3.30.200.20 IPR000719 IPR008271 IPR010513 IPR011009 IPR011047 IPR018391 IPR018997 IPR027295 NON_CYTOPLASMIC_DOMAIN PF00069 PF06479 PS00108 PS50011 PS51257 PS51392 PTHR13954 PTHR13954:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SM00564 SM00580 SSF50998 SSF56112 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd10422 mobidb-lite	35
Lj2g3v1599840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: serine/threonine-protein kinase ppk4-like [Cicer arietinum] gi\|502153776\|ref\|XP_004509458.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:3.30.200.20 IPR000719 IPR008271 IPR010513 IPR011009 IPR018997 NON_CYTOPLASMIC_DOMAIN PF00069 PF06479 PS00108 PS50011 PS51392 PTHR13954 PTHR13954:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SM00580 SSF56112 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TRANSMEMBRANE cd10422 mobidb-lite	29
LotjaGi2g1v0353800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kinase, putative; TAIR: AT2G17520.1 Endoribonuclease/protein kinase IRE1-like protein; Swiss-Prot: sp\|Q9C5S2\|IRE1A_ARATH Serine/threonine-protein kinase/endoribonuclease IRE1a; TrEMBL-Plants: tr\|G7K1A9\|G7K1A9_MEDTR Endoribonuclease/kinase IRE1-like protein; Found in the gene: LotjaGi2g1v0353800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:1.20.1440.180 G3DSA:2.130.10.10 G3DSA:3.30.200.20 IPR000719 IPR008271 IPR010513 IPR011009 IPR011047 IPR015943 IPR018391 IPR018997 IPR038357 NON_CYTOPLASMIC_DOMAIN PF00069 PF06479 PS00108 PS50011 PS51257 PS51392 PTHR13954 PTHR13954:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SM00564 SM00580 SSF50998 SSF56112 SignalP-noTM TMhelix TRANSMEMBRANE cd10422 mobidb-lite	37
LotjaGi4g1v0134700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kinase, putative; TAIR: AT2G17520.1 Endoribonuclease/protein kinase IRE1-like protein; Swiss-Prot: sp\|Q9C5S2\|IRE1A_ARATH Serine/threonine-protein kinase/endoribonuclease IRE1a; TrEMBL-Plants: tr\|K7LEW9\|K7LEW9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0134700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:1.20.1440.180 G3DSA:2.130.10.10 G3DSA:3.30.200.20 IPR000719 IPR008271 IPR010513 IPR011009 IPR015943 IPR018997 IPR038357 NON_CYTOPLASMIC_DOMAIN PF00069 PF06479 PS00108 PS50011 PS51392 PTHR13954 PTHR13954:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SM00580 SSF56112 SignalP-TM SignalP-noTM TRANSMEMBRANE cd10422 mobidb-lite	32

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00