Domain Predictions — View

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cd17954

Source: CDD

Description

DEADc_DDX47

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0167700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase DeaD; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp\|Q8GY84\|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr\|K7KC67\|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700	Domains G3DSA:3.40.50.300 IPR000629 IPR001650 IPR011545 IPR014001 IPR014014 IPR027417 PF00270 PF00271 PS00039 PS51192 PS51194 PS51195 PTHR24031 PTHR24031:SF676 SM00487 SM00490 SSF52540 cd17954 cd18787	20
LotjaGi2g1v0167700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase DDX47; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp\|Q8GY84\|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr\|A0A1J7G8N7\|A0A1J7G8N7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700	Domains G3DSA:3.40.50.300 IPR000629 IPR001650 IPR011545 IPR014001 IPR014014 IPR027417 PF00270 PF00271 PS00039 PS51192 PS51194 PS51195 PTHR24031 PTHR24031:SF676 SM00487 SM00490 SSF52540 cd17954 cd18787	20
LotjaGi2g1v0167700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase DeaD; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp\|Q8GY84\|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr\|K7KC67\|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700	Domains G3DSA:3.40.50.300 IPR000629 IPR001650 IPR011545 IPR014001 IPR014014 IPR027417 PF00270 PF00271 PS00039 PS51192 PS51194 PS51195 PTHR24031 PTHR24031:SF676 SM00487 SM00490 SSF52540 cd17954 cd18787	20
LotjaGi2g1v0167700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase DeaD; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp\|Q8GY84\|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr\|K7KC67\|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700	Domains G3DSA:3.40.50.300 IPR000629 IPR001650 IPR011545 IPR014001 IPR027417 PF00270 PF00271 PS00039 PS51192 PS51194 PTHR24031 PTHR24031:SF676 SM00487 SM00490 SSF52540 cd17954 cd18787	18
LotjaGi2g1v0167700.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase DDX47; TAIR: AT5G60990.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp\|Q8GY84\|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10; TrEMBL-Plants: tr\|K7KC67\|K7KC67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0167700	Domains G3DSA:3.40.50.300 IPR000629 IPR001650 IPR011545 IPR014001 IPR027417 PF00270 PF00271 PS00039 PS51192 PS51194 PTHR24031 PTHR24031:SF676 SM00487 SM00490 SSF52540 cd17954 cd18787	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd18787	CDD	1	20.00