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GO:0030123

Overview

Field Value
Namespace Cellular component
Short description AP-3 adaptor complex
Full defintion A heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. AP-3 does not appear to associate with clathrin in all organisms. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).
Subterm of

Relationships

The relationship of GO:0030123 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
PMID
Conservation and diversification of dileucine signal recognition by adaptor protein (AP) complex variants.
J Biol Chem. ; 286 (3): 2022–30.PMID: 21097499

The clathrin-associated, heterotetrameric adaptor protein (AP) complexes, AP-1, AP-2, and AP-3, recognize signals in the cytosolic domains of transmembrane proteins, leading to their sorting to endosomes, lysosomes, lysosome-related organelles, and/or the basolateral membrane of polarized epithelial cells. One type of signal, referred to as "dileucine-based," fits the consensus motif (D/E)XXXL(L/I). Previous biochemical analyses showed that (D/E)XXXL(L/I) signals bind to a combination of two subunits of each AP complex, namely the AP-1 γ-σ1, AP-2 α-σ2, and AP-3 δ-σ3 hemicomplexes, and structural studies revealed that an imperfect variant of this motif lacking the (D/E) residue binds to a site straddling the interface of α and σ2. Herein, we report mutational and binding analyses showing that canonical (D/E)XXXL(L/I) signals bind to this same site on AP-2, and to similar sites on AP-1 and AP-3. The strength and amino acid requirements of different interactions depend on the specific signals and AP complexes involved. We also demonstrate the occurrence of diverse AP-1 heterotetramers by combinatorial assembly of various γ and σ1 subunit isoforms encoded by different genes. These AP-1 variants bind (D/E)XXXL(L/I) signals with marked preferences for certain sequences, implying that they are not functionally equivalent. Our results thus demonstrate that different AP complexes share a conserved binding site for (D/E)XXXL(L/I) signals. However, the characteristics of the binding site on each complex vary, providing for the specific recognition of a diverse repertoire of (D/E)XXXL(L/I) signals.

Associated Lotus transcripts 9

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
PREDICTED: AP-3 complex subunit sigma-like [Cicer arietinum] gi|502153217|ref|XP_004509260.1| 2
PREDICTED: AP-3 complex subunit sigma-like [Cicer arietinum] gi|502153217|ref|XP_004509260.1| 2
PREDICTED: AP-3 complex subunit sigma-like [Cicer arietinum] gi|502153217|ref|XP_004509260.1| 2
PREDICTED: AP3-complex subunit beta-A-like [Glycine max] gi|356501063|ref|XP_003519348.1| 2
PREDICTED: AP3-complex subunit beta-A-like [Glycine max] gi|356501063|ref|XP_003519348.1| 2
PREDICTED: AP-3 complex subunit delta-like [Cicer arietinum] gi|502163538|ref|XP_004512869.1| 2
Beta-adaptin-like protein; TAIR: AT3G55480.2 protein affected trafficking 2; Swiss-Prot: sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A; TrEMBL-Plants: tr|K7KAL6|K7KAL6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0090500 2
AP-1 complex subunit sigma-like protein; TAIR: AT3G50860.1 Clathrin adaptor complex small chain family protein; Swiss-Prot: sp|Q8VZ37|AP3S_ARATH AP-3 complex subunit sigma; TrEMBL-Plants: tr|A0A072TSQ8|A0A072TSQ8_MEDTR AP-1 complex subunit sigma-like protein; Found in the gene: LotjaGi1g1v0416600 2
AP-3 complex subunit delta; TAIR: AT1G48760.1 delta-adaptin; Swiss-Prot: sp|Q9C744|AP3D_ARATH AP-3 complex subunit delta; TrEMBL-Plants: tr|G7L9R3|G7L9R3_MEDTR AP-3 complex subunit delta; Found in the gene: LotjaGi6g1v0173900 2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
Cellular component AP-3 adaptor complex 1 11.11