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LotjaGi6g1v0173900.1

Overview

Field Value
Gene ID LotjaGi6g1v0173900
Transcript ID LotjaGi6g1v0173900.1
Lotus japonicus genome version Gifu v1.2
Description AP-3 complex subunit delta; TAIR: AT1G48760.1 delta-adaptin; Swiss-Prot: sp|Q9C744|AP3D_ARATH AP-3 complex subunit delta; TrEMBL-Plants: tr|G7L9R3|G7L9R3_MEDTR AP-3 complex subunit delta; Found in the gene: LotjaGi6g1v0173900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:46304230..46311483) extracted from Lotus japonicus Gifu genome v1.2.

TCTCAATTAGATTTTTTTTGGGTCAAAATTCTCAAATAAATTGGTTTACAAATTCATTAATTTACATGGGCCTTTGATAT TGGGCTGGCCCAAGCAATTACAAAATCCTGCTCCACCAACAACAACAACAACACCAGTTCGAGTTTAATTTCTCCTCACC ATCACGGTGGCAATCGTCACTTCCTCCTCCTTCTCCTCCTCCATCCATGGCGGGGTCCTCATCTTCATCGATCATGGACA ATCTCTTCCAACGCACACTGGAAGATCTCATCAAATCCCTCCGCCTCCAGCTCCTCCCGGAATCCACCGCCATCTCCAAA GCCACAGAAGAAATCCGCCGCGAGATCAAATCCACCGACCCCAGCACCAAATCCACCGCCCTCGAAAAACTCACCTACCT CTCCGCCGTCCACGGCGTCGACATGACCTGGGCCTCCTTCCACGTCGTCGAAGTCATGTCCTCCTCGCGATTCTCCCACA AGAGAATCGGTTACTACGCCGCCGCAACTTCCTTCCACGACGACACCCCCGTTCTCCTCCTCATCACCAACCAGCTTCGC AAAGATCTCTCCGCCGCGAACAACCCCTTTGAACCCTCCCTCGCCCTCCACTGCCTCTCCAACATCGCCACCACCGATCT CGCCAGAGACCTCACCCCGGAGATTTTCAACCTCCTTTCATCTTCTAGGGTTTACGTTAAGAAGAAAGCAATCGCCGTCG TTTTGAGAATCTTTGACAAGTACCCTGACGCTGTCAGGGTCTGCTTCAAGCGATTGGTGGAGAATCTAGAAAGCTCCGAC CCTCAGGTTGTGACCGCGGTGATCGGCGTTTTCTGCGAGCTTGCCGCGAGGGACCCGCGATCGTATCTCCCGCTCGCGCC GGAGTTTCATAGGGTTTTGGTTGAATCTAAGAACAATTGGGTTCTCATTAAGGTGTTGAAGATATTTTCAAAGTTGGCTC CATTGGAACCTAGGTTGGGGAAGAGGATAGTTGAGCCTGTTTGTGATCACATGAGAAGATCTGGGGCTAAGTCATTGGTT TTTGAGTGTGTGAGGACTGTGCTAACTTGCTTTAGTGATGATGGGGATTATGATTCTGCTGTTAACCTTGCTGTTGCAAA GGTGAAGGAGTTTCTTGCTGATCAGGATCCCAATCTCAGGTATCTGGGGTTGCAAGCACTTTCAGTTGCTGCAACGAGAC ACTCGTGGGCAGTCTTGGAGAACAAGGAAGCTGTGATTAAGTCGTTGAGTGATGACGATTCTAACATCAAAATTGAATCG CTGTGTTTGTTGATGGCGATGGTGTCTGAGAGCAATGTGGTGGAGATATCCAGGGTGTTGCTGAATTATGCATTGAAATC CGACCCGGAGTTTTGCAATGAGATTTTAGGTTCCATTTTGGTGACATGTAGTAGGAATGTGTATGAGATCATTGTTGACT TTGATTGGTATGTGTCTCTTCTTGGAGAAATGGCTACGATTCCTAATTGTCAAAAGGGTGAGGAGATTGAGAATCAGCTT GTTGATATTGGCATGAGAGTTAAGGATGCTAGGTCGCAGCTTGTTCGGGTTGGTCGCGATTTGTTGATTGATCCGGCGTT GCTAGGTAATGTGTACTTGCATAGGATATTGTGTGCTGCTGCTTGGGTTTCAGGGGAGTATGTTGAGGTTGCTAGCAATC CATTGGAGCTCATGGATGCACTCCTACAACCTCGTACCAATCTCTTGCCACCATCCATAAGAGTAGTTTATATTAATGCT TCTCTCAAGGTTTTAATTTTTTTCTTGGAATGTTACCTTTTGCAAAATGATGGTGGTGATTGTGAATCCTCAAATTCTGC TATTAACTTGTATAGTGTAAAAAAGAACCCTGAGGCTCCTGAATTAGCAACAGGTCAAGGTTCAAATTATGAACAGGATG AGGGGTTTAACCCAAGAAACACAGCTGACTTTTCTGAAGATCTTTCGGTTGAAAACGACACTGATGGAGTTCTCACTGAT GGTCAGACATTTACACATTCTCTTTTGGCAAAGAAGGATTTCTCACGTGAATCTATTGTAAGCCTGTTAAGTCGAATTGA ATTGGTTTTTGGTCCACTAGCAGCAAACCCGGATGTTGAAGTGCTGGAGAGAGCTCGTAACATACTTAGCTTTGTTCAGT TGATTAAAGCTGAAATAATTGACAATTCAGTTCAGAATGCGGATATTATGGACAAGAAATATACTCAAGTTTCAGCTATT ATCAAATTGATGCGTGATGCTTTTTCTGTGGAACTTGGTCCAGTCTCGGTAAGTGCACAGGGAAGAGTTGCTGTACCAGA TGGATTGGATCTTAAGGAGAATCTTGATGACTTAAAAGCTATATGTGGTGATATTGAGCTACCCACATCAAGTTCATTTA GCACTGGGGGCCCTCACTTTGCCACTACTTCTGATGCTTCTTCATCTAATCTTTTGAAAAATGAAGAGTCAGGGTCATCA AATGAATCTACATCCTTGCTTGAACACCGGAAGCGGCATGGATTGTATTACCTTCCTTCAGAGAAGGGTGAGATTGTTCC AAGAGATTATCCTCCTGCAAATGACCCAAAGTCAAACAGTAATAATGATGAAGCTGCAGAGCTAGCCAAGTTGACAGAGC AATCACTTCTTTTGAAGAAAAAGACAAACCAAATGAAGCCCAGGCCTGTTGTGGTGAAATTGGATGATGGGGATGTTGCA CCAGTTTCAGTCAAAAGCCCCGAGCCAAGGAATGATTCTCTTTCTGTTGCTGTAAAAGATGCTCTTCTAGGAAATGAAAC CAGGTCGAGTTTGTCTCGAGGCAATCCTTCTGATAAGTCATCTAGTAAGCGGAAAGAGAAGAAGAAACTAGGCACATCCT CTGAAATGAAAGAAAATCTAGGTGATGCAGAAAAGCCTGATACTGAAAACCCAAATACCAGTGAAAATCATGGTCATAAA GAGAGAAGGCGGAGAGGTAAGGATAAGATTGTTGAAGGGGAAGAACATGGTCAGAAGGTAAAGAAAAAGAGCAGCCACCG CCATGGTAGGCGCAAAACTCATCAAAGAGCTGAATCACCCTTAAATGTGGTTTCCCAAACACCAGTAATTCCTGATTTTC TTTTGTAGCATTTAAGGATTTTGATTTGTCATCACCTTTTGTTTTTGATAGAGGCTGTTTACCTGTATCTTAGTGCTGAG CCTTTAACCTAGTTCCATAGATTTTTGTTTTCCTTTGTGTGTGTCATTTCTTGTAATTTGTTGATACTTGATACTATTTT CATTGCTTGTTGCCTGTTTTTTGTATATTTCACAGAACGAGCATATTAAGAAGTAAAATTTCAAGTTGTTGTTTGGCTGG CCTTTGTTTTCTTGATATTGGAGGAATTATAATTGAAACTTTTTCCTTTTAATTCTAGTTTTTTTTCTGGAAATTCTCGT GCTCTCTGTATTAAGATCAAAATGATGTTTTTAAATTATTGAGGGTAGTGCAGTGACTTCTCTTGTCATTAATAATTGTT GAAGTTGTGATATATCGCTCTGCTATTAGCTTGAGTGTTTATATATTCTTGTAAGGCTAAAGGAGGGAACTCAACGCTGT GCTAATATGATTCCATTATGAGTGTTTATACTATGTCTGTCTTTTTTAGTTGTTCTTAGTAGTGATTAACATTGAATTAG CCCAAATTAGAAGGCTTTAATTATTTAGTTACTGAAGATGCTAGAGGTATGTATTCTCGTGTTCTTCATAGATACTGAAG GCTGTTACATTCACCATAGGAGAGATGAGTGAGAATACAGTTTACCGTTATCATTGTATCCAGCAATGTGGTGAGCACCA AATGTAAGGATTAGAGTTGAAGAGATAGTGTGTACTTGATGAGTGTTTCCTTGATGTGTATATATAAGCAAAATTGTAAC AAACCTGAAGATAATTACCTTAATTATGGACTTGGTCTATTGGGCTAACGGGCCTATCTTTATCATGTAACAATAAAAAA AATTATTGTTTCAATTATTTGGGTAAGGCTAATTTATTATTTATTGTAGATAGGACATGTAAATATGATTGGGGCTTCGT TTACATTACTATCAATAAAAGAACACTTAGGCCATAATGTCACATAGTATACATCTAGAGACTTCATCCACCAAAACCTG GCTCATATATCCAAACAGGCTTGGAGAATTCAGGTGAATCCAAGCGCACTGTGGGTCCGAGTTTTGAAATCCATTTATTT TCCAAATCATGAATTCTTGGATGCTCCCAAGCCTAAGAAGGCTTCCTGGATGTGGTCGAGCATTCTGGCTGGAAGGGACT TCCTTTGAGCCAAGTGCAGATGGGGTATCGCCACCGGAGATCATGTCAACGTTTGGAAAGATTCTTGGGTTTGGGATGGG ACTAATCTCCAGCAGTGGACAAATGGTCAAGAACTCCTCGTCAAAGAACTTATTGATCAGAGCAGTAGGAGATGGAATGT GAGTAAAATTCGCTCAATGCTCCCAGAACATGTTGCGTCCAAAGTTCTCCAAACTCCCCTGGGCCTGGTAGGCGACACAG ATAAACTGATATGGCCCCATAACAAGTCAGGTGAATATTGCATCAAAACAGGCTACCATGTCTCCAGAGTCTCTTCACCA TCGGTTTCCAATGATACTAGTTCTTCCCACCAAGCGCCTAGTGAGCTATGGAACATAATTTGGGGAAGTCAAACCCCACA GAAGCTTAAACTATTTTGCTGGAAAGCGTGCACTAACTAACTCTCTAGCAGTAAAAGGAAACCTTTTTCGCAGGAGAATG GCCACCTCTGAAGTGTGTCCAATCTGCAATAATGCGGTAGAAACAATCGAGCATACCCTGCTTTTATGTCCATGGACTCG GGCAGTCTGGTTCGGGTCCCCTCTACAACTCTCTATCCCAGTCGAGGGGCTCCAACGCTTTGACATATGGCTCCTGCAAA TGGCAACCAAATACCAACAATTATCAACCACGGGTACAGAACTCTCCTTGCTCATCTGCACTCTTTGGGCAATCTGGAAA GGTAGGAACAGAGCCATCTTCCATGAGGAACAGCCCAACCCGATGCTTACAATCAGACATGCTTTCCTTAACCAGGAAGA CTGCACCTTTGAGGGACGCCAATCAAACTTGTTAGAATAATATAAAACTATTAAAATGACCCTTACCCAATAGCTTAAGC TTTTGGGATAAGTGGTTGTTTTACATGGTATCAGGTTTTAGGTTGAAACCCTAGCCTACCAACCCTCTCTGTGCCGCCAC TATCCTTTCTCTCTTTTATTCTCTGGTTTAATTGTTGCAGCCATTAATTTCTTGTGTTTTTCGTACACTACTGCTGCCTT GTGCTCCGCGCCAGCCAGCACCTTGTCTTTCTGCGCCGCTAGACACGTGCAGCCGCCAGACACGCGTCCAGTCAAACTGT CTCCTGCTGCACCGCTAGACAGCCTCGTGCTTCGTGTCCTGCTCTTGTGTTTGTTCCCCTTGCTTTCCGTGTGCACTCCC ATCATCCCTCGTTCTTGTCTCTTGCCGCCGACAGCTTTTGTCTCCTTGCTGCCAGCCACGCGGGACACGAGCCAGCACGT CGTAAGTCCTTTCTTTCCGCGCCGTCAGACAACCGCCAGCCACTTGTGCCTAGATTCCGTGCATCATCGATTTCCGTGCC CGAACCCCAAGCCTTGTTGACCGTGCTGTCCCACACACCTTGTTCCTGCACCAGCTATTTTGTCTTTCTTGTTGGCAGAT TATTTATTTATTTATTTTTGGGACAATTGTGTTCTCTTTCCCATGGCTTCGGACGCTACACCTCCGACTTTTTCCTTCAA CACTTTGGTGCATATGATTATAGTGAAACTAAAATCAGATAATTTTCTTCTCTGGCGTAAACAGGTCACGGCTCTTCTTC AGAATCAAAATCTTTATGACATTGTTGATCCTACCGTTGATCCACCACCGGAGTTTGTGCCACAGAATGTTTCTCCTGGT TTGCGTGCTGTTCCAGGTCCAAATCCTTCCTTTGCTCAGTGGCAGACTCGCGATCGCAACGTCAACAGTCTTCTTCTATC CTCACTGACTGATGAAGCTTTATCTGAGACCCTCAGTGCTACCACTGCCCGGGATGTTTGGACTGCTCTTCATTCTGCTT ATGTTTCACGCAGCAAGGCCCGTGAACTGCGTCTTCGTGATGAGCTACAACTCATGCGTCGTGGTTCCCTCTCCGTTTCT GAATATGGACGGAAATTCCGCACTATTTGTGATCAATTGGCTGCTATTGGTGCCCCTGTCGCTAATGATGACAAAGTTCA CTGGTTTCTTCGTGGTCTTGGCCCCTCATACACAAATTTCTCCACATGACAGCTTGATCAGGTACCCTTACCTTTCTTTA CTGACATTCTTTGTAAGGTCGAGAGCCATGCTATTTTTCAGGCTTCTCTTGAGGAATCAGTGACTCCTCCACCTGTTGTT TTCCATGCGAGCAATCAGACTCGCTCTTCTGGCAATCAGTCTTCCACTAGTGGCAACCGTGGTAATTATGGTGGTGGTTC TCGGGGTGGAAATCGTGGCAACTCTAATGGTGGATCTCGTCAGCGTCGCAATAATGGTGGCTCTGGTCGTCGTGGCTCTT ACATTCCTCGCTGTCAAATTTGTCGTGAGCAGGGCCATTATGCTGATAAGTGTCCGGTTCGCTGGGATCGTTCTTCTGAG TCTGCCAATTTGGCTCAATCTTTTGCTGCGGGTTGTTCATTGGACAACTCCAACCGTTCCGACTGGTATATGGATACAGG TGCCACCTCTCATATGACTCCTTCTCTATCTCAGCTGACGGACTCTCAGGATTACTCCGGTAATGATCGTGTTCTTGTTG GTAATGGGGCTGGTTTACATATTTCTCATATTGGTTCTCGTTCTGTTTCACATTCTGTTCCTTTATCTAATGTTTTGGTT GTGCCTCGGCTAACTAAAAATCTTGTCTCTGTTAGCAAATTGTCTCGTGAACATAATGCTAAAGCTATTTTTCTGGATGA TTCTTTTGTTATTCAGAACCGACAGACAGGCGCCGTTCTGGGAAGGGGCCAATGTGATAACGGACTTTATGTGCTTGACC AAGGATCGCAGGCGCTGCTTACTACCAGTTCTCCATTACCTCGTGCCTCCTTTGAATTGTGGCACTCACGATTAGGACAT GTCAATTTTGAAATTATTCAACAATTGCATAAACTTGGTTGTTTTAATGTTTCC
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0173900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGGGTCCTCATCTTCATCGATCATGGACAATCTCTTCCAACGCACACTGGAAGATCTCATCAAATCCCTCCGCCT CCAGCTCCTCCCGGAATCCACCGCCATCTCCAAAGCCACAGAAGAAATCCGCCGCGAGATCAAATCCACCGACCCCAGCA CCAAATCCACCGCCCTCGAAAAACTCACCTACCTCTCCGCCGTCCACGGCGTCGACATGACCTGGGCCTCCTTCCACGTC GTCGAAGTCATGTCCTCCTCGCGATTCTCCCACAAGAGAATCGGTTACTACGCCGCCGCAACTTCCTTCCACGACGACAC CCCCGTTCTCCTCCTCATCACCAACCAGCTTCGCAAAGATCTCTCCGCCGCGAACAACCCCTTTGAACCCTCCCTCGCCC TCCACTGCCTCTCCAACATCGCCACCACCGATCTCGCCAGAGACCTCACCCCGGAGATTTTCAACCTCCTTTCATCTTCT AGGGTTTACGTTAAGAAGAAAGCAATCGCCGTCGTTTTGAGAATCTTTGACAAGTACCCTGACGCTGTCAGGGTCTGCTT CAAGCGATTGGTGGAGAATCTAGAAAGCTCCGACCCTCAGGTTGTGACCGCGGTGATCGGCGTTTTCTGCGAGCTTGCCG CGAGGGACCCGCGATCGTATCTCCCGCTCGCGCCGGAGTTTCATAGGGTTTTGGTTGAATCTAAGAACAATTGGGTTCTC ATTAAGGTGTTGAAGATATTTTCAAAGTTGGCTCCATTGGAACCTAGGTTGGGGAAGAGGATAGTTGAGCCTGTTTGTGA TCACATGAGAAGATCTGGGGCTAAGTCATTGGTTTTTGAGTGTGTGAGGACTGTGCTAACTTGCTTTAGTGATGATGGGG ATTATGATTCTGCTGTTAACCTTGCTGTTGCAAAGGTGAAGGAGTTTCTTGCTGATCAGGATCCCAATCTCAGGTATCTG GGGTTGCAAGCACTTTCAGTTGCTGCAACGAGACACTCGTGGGCAGTCTTGGAGAACAAGGAAGCTGTGATTAAGTCGTT GAGTGATGACGATTCTAACATCAAAATTGAATCGCTGTGTTTGTTGATGGCGATGGTGTCTGAGAGCAATGTGGTGGAGA TATCCAGGGTGTTGCTGAATTATGCATTGAAATCCGACCCGGAGTTTTGCAATGAGATTTTAGGTTCCATTTTGGTGACA TGTAGTAGGAATGTGTATGAGATCATTGTTGACTTTGATTGGTATGTGTCTCTTCTTGGAGAAATGGCTACGATTCCTAA TTGTCAAAAGGGTGAGGAGATTGAGAATCAGCTTGTTGATATTGGCATGAGAGTTAAGGATGCTAGGTCGCAGCTTGTTC GGGTTGGTCGCGATTTGTTGATTGATCCGGCGTTGCTAGGTAATGTGTACTTGCATAGGATATTGTGTGCTGCTGCTTGG GTTTCAGGGGAGTATGTTGAGGTTGCTAGCAATCCATTGGAGCTCATGGATGCACTCCTACAACCTCGTACCAATCTCTT GCCACCATCCATAAGAGTAGTTTATATTAATGCTTCTCTCAAGGTTTTAATTTTTTTCTTGGAATGTTACCTTTTGCAAA ATGATGGTGGTGATTGTGAATCCTCAAATTCTGCTATTAACTTGTATAGTGTAAAAAAGAACCCTGAGGCTCCTGAATTA GCAACAGGTCAAGGTTCAAATTATGAACAGGATGAGGGGTTTAACCCAAGAAACACAGCTGACTTTTCTGAAGATCTTTC GGTTGAAAACGACACTGATGGAGTTCTCACTGATGGTCAGACATTTACACATTCTCTTTTGGCAAAGAAGGATTTCTCAC GTGAATCTATTGTAAGCCTGTTAAGTCGAATTGAATTGGTTTTTGGTCCACTAGCAGCAAACCCGGATGTTGAAGTGCTG GAGAGAGCTCGTAACATACTTAGCTTTGTTCAGTTGATTAAAGCTGAAATAATTGACAATTCAGTTCAGAATGCGGATAT TATGGACAAGAAATATACTCAAGTTTCAGCTATTATCAAATTGATGCGTGATGCTTTTTCTGTGGAACTTGGTCCAGTCT CGGTAAGTGCACAGGGAAGAGTTGCTGTACCAGATGGATTGGATCTTAAGGAGAATCTTGATGACTTAAAAGCTATATGT GGTGATATTGAGCTACCCACATCAAGTTCATTTAGCACTGGGGGCCCTCACTTTGCCACTACTTCTGATGCTTCTTCATC TAATCTTTTGAAAAATGAAGAGTCAGGGTCATCAAATGAATCTACATCCTTGCTTGAACACCGGAAGCGGCATGGATTGT ATTACCTTCCTTCAGAGAAGGGTGAGATTGTTCCAAGAGATTATCCTCCTGCAAATGACCCAAAGTCAAACAGTAATAAT GATGAAGCTGCAGAGCTAGCCAAGTTGACAGAGCAATCACTTCTTTTGAAGAAAAAGACAAACCAAATGAAGCCCAGGCC TGTTGTGGTGAAATTGGATGATGGGGATGTTGCACCAGTTTCAGTCAAAAGCCCCGAGCCAAGGAATGATTCTCTTTCTG TTGCTGTAAAAGATGCTCTTCTAGGAAATGAAACCAGGTCGAGTTTGTCTCGAGGCAATCCTTCTGATAAGTCATCTAGT AAGCGGAAAGAGAAGAAGAAACTAGGCACATCCTCTGAAATGAAAGAAAATCTAGGTGATGCAGAAAAGCCTGATACTGA AAACCCAAATACCAGTGAAAATCATGGTCATAAAGAGAGAAGGCGGAGAGGTAAGGATAAGATTGTTGAAGGGGAAGAAC ATGGTCAGAAGGTAAAGAAAAAGAGCAGCCACCGCCATGGTAGGCGCAAAACTCATCAAAGAGCTGAATCACCCTTAAAT GTGGTTTCCCAAACACCAGTAATTCCTGATTTTCTTTTGTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0173900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAGSSSSSIMDNLFQRTLEDLIKSLRLQLLPESTAISKATEEIRREIKSTDPSTKSTALEKLTYLSAVHGVDMTWASFHV VEVMSSSRFSHKRIGYYAAATSFHDDTPVLLLITNQLRKDLSAANNPFEPSLALHCLSNIATTDLARDLTPEIFNLLSSS RVYVKKKAIAVVLRIFDKYPDAVRVCFKRLVENLESSDPQVVTAVIGVFCELAARDPRSYLPLAPEFHRVLVESKNNWVL IKVLKIFSKLAPLEPRLGKRIVEPVCDHMRRSGAKSLVFECVRTVLTCFSDDGDYDSAVNLAVAKVKEFLADQDPNLRYL GLQALSVAATRHSWAVLENKEAVIKSLSDDDSNIKIESLCLLMAMVSESNVVEISRVLLNYALKSDPEFCNEILGSILVT CSRNVYEIIVDFDWYVSLLGEMATIPNCQKGEEIENQLVDIGMRVKDARSQLVRVGRDLLIDPALLGNVYLHRILCAAAW VSGEYVEVASNPLELMDALLQPRTNLLPPSIRVVYINASLKVLIFFLECYLLQNDGGDCESSNSAINLYSVKKNPEAPEL ATGQGSNYEQDEGFNPRNTADFSEDLSVENDTDGVLTDGQTFTHSLLAKKDFSRESIVSLLSRIELVFGPLAANPDVEVL ERARNILSFVQLIKAEIIDNSVQNADIMDKKYTQVSAIIKLMRDAFSVELGPVSVSAQGRVAVPDGLDLKENLDDLKAIC GDIELPTSSSFSTGGPHFATTSDASSSNLLKNEESGSSNESTSLLEHRKRHGLYYLPSEKGEIVPRDYPPANDPKSNSNN DEAAELAKLTEQSLLLKKKTNQMKPRPVVVKLDDGDVAPVSVKSPEPRNDSLSVAVKDALLGNETRSSLSRGNPSDKSSS KRKEKKKLGTSSEMKENLGDAEKPDTENPNTSENHGHKERRRRGKDKIVEGEEHGQKVKKKSSHRHGRRKTHQRAESPLN VVSQTPVIPDFLL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF037092
1 967 967 1.1E-214 –
PANTHER
PTHR22781
10 959 950 1.6E-271
IPR017105
Gene3D
G3DSA:1.25.10.10
13 549 537 3.4E-123
IPR011989
Pfam
PF01602
35 549 515 2.3E-87
IPR002553
SUPERFAMILY
SSF48371
35 651 617 1.08E-75
IPR016024
MobiDBLite
mobidb-lite
558 582 25 - –
MobiDBLite
mobidb-lite
560 582 23 - –
MobiDBLite
mobidb-lite
731 762 32 - –
MobiDBLite
mobidb-lite
731 800 70 - –
MobiDBLite
mobidb-lite
863 973 111 - –
MobiDBLite
mobidb-lite
876 938 63 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006886
Biological process Intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Subterm of
Part of
GO:0015031
Biological process Protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Subterm of
GO:0016192
Biological process Vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
Subterm of
GO:0030117
Cellular component Membrane coat Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.
Subterm of
Part of
GO:0030123
Cellular component AP-3 adaptor complex A heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. AP-3 does not appear to associate with clathrin in all organisms. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0173900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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