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GO:0030686

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description 90S preribosome
Full defintion A large ribonucleoprotein complex considered to be the earliest preribosomal complex. In S. cerevisiae, it has a size of 90S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
Subterm of

Relationships

The relationship of GO:0030686 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCvw
PMID
Ribosome biogenesis: of knobs and RNA processing.Granneman S, Baserga SJ
Exp Cell Res. 2004 May 15; 296 (1): 43–50.PMID: 15120992

The synthesis of ribosomes in eukaryotes involves processing of pre-ribosomal RNA (pre-rRNA) and sequential assembly of a large number of ribosomal proteins on the rRNAs. Although we have gained tremendous insights into the processing of pre-rRNA intermediates in the last three decades, little was known about the dynamic nature of ribosome biogenesis. Only recently the development of efficient affinity-purification procedures and mass-spectrometry techniques has allowed the isolation of large pre-ribosomal complexes, which led to the identification of several ribosome assembly intermediates and a large number of novel ribosome assembly factors. In this mini-review, we summarize some of the discoveries that have been made in the field of ribosome biogenesis in the past 30 years and highlight some key aspects about what remains to be learned.

Associated Lotus transcripts 2

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
LotjaGi3g1v0004900.1
– Chaperone protein TorD; TAIR: AT2G01640.1 ribosome biogenesis protein; Swiss-Prot: sp|A9MJV6|TORD_SALAR Chaperone protein TorD; TrEMBL-Plants: tr|I3SP06|I3SP06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0004900
GO terms
4
LotjaGi5g1v0328000.1
– Chaperone protein TorD; TAIR: AT2G01640.1 ribosome biogenesis protein; Swiss-Prot: sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic; TrEMBL-Plants: tr|I3SP06|I3SP06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0328000
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0030688
Cellular component Preribosome, small subunit precursor 1 50.00