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Field | Value |
---|---|
Namespace | Biological process |
Short description | TRNA re-export from nucleus |
Full defintion | The directed movement from the nucleus to the cytoplasm of a tRNA that was previously exported to the cytoplasm and then imported back into the nucleus. The processes of primary tRNA export and secondary export (re-export) can be distinguished because in organisms in which tRNA splicing occurs in the cytoplasm, the export of a mature tRNA must occur by re-export. |
Subterm of |
The relationship of GO:0071528 with other GO terms.
Relationship type | GO terms |
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Is a | |
Regulates | n.a. |
Part of | n.a. |
Positively regulates | n.a. |
Negatively regulates | n.a. |
A force layout showing the ancestor tree for GO:0071528, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.
This table contains additional metadata associated with the GO entry's definition field.
Field | Value |
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GOC | mcc |
PMID | Regulation of tRNA bidirectional nuclear-cytoplasmic trafficking in Saccharomyces cerevisiae. Mol Biol Cell. 2010 Feb 15; 21 (4): 639–49.PMID: 20032305 tRNAs in yeast and vertebrate cells move bidirectionally and reversibly between the nucleus and the cytoplasm. We investigated roles of members of the beta-importin family in tRNA subcellular dynamics. Retrograde import of tRNA into the nucleus is dependent, directly or indirectly, upon Mtr10. tRNA nuclear export utilizes at least two members of the beta-importin family. The beta-importins involved in nuclear export have shared and exclusive functions. Los1 functions in both the tRNA primary export and the tRNA reexport processes. Msn5 is unable to export tRNAs in the primary round of export if the tRNAs are encoded by intron-containing genes, and for these tRNAs Msn5 functions primarily in their reexport to the cytoplasm. The data support a model in which tRNA retrograde import to the nucleus is a constitutive process; in contrast, reexport of the imported tRNAs back to the cytoplasm is regulated by the availability of nutrients to cells and by tRNA aminoacylation in the nucleus. Finally, we implicate Tef1, the yeast orthologue of translation elongation factor eEF1A, in the tRNA reexport process and show that its subcellular distribution between the nucleus and cytoplasm is dependent upon Mtr10 and Msn5. |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Transcript | Name | Description | GO terms | GO count |
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– | Exportin-T; TAIR: AT1G72560.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q7PC79|XPOT_ARATH Exportin-T; TrEMBL-Plants: tr|A0A0S3RIV6|A0A0S3RIV6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800700_LC | 4 | ||
– | Exportin-T; TAIR: AT1G72560.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q7PC79|XPOT_ARATH Exportin-T; TrEMBL-Plants: tr|A0A0S3RIV6|A0A0S3RIV6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800700_LC | 4 |
A list of co-occurring GO terms within the L. japonicus gene space:
GO term | Namespace | Name | Observations | Saturation (%) |
---|---|---|---|---|
Biological process | TRNA re-export from nucleus | 1 | 50.00 |