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GO:0000049

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description TRNA binding
Full defintion Interacting selectively and non-covalently with transfer RNA.
Subterm of

Relationships

The relationship of GO:0000049 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCai

Associated Lotus transcripts 46

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0316529.1
– PREDICTED: phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial-like [Glycine max] gi|356569020|ref|XP_003552705.1|
GO terms
4
Lj0g3v0326999.1
– PREDICTED: phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial-like [Glycine max] gi|356569020|ref|XP_003552705.1|
GO terms
4
Lj1g3v0054690.1
– PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi|502080886|ref|XP_004486713.1|
GO terms
4
Lj1g3v1147490.1
– PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] gi|356516237|ref|XP_003526802.1|
GO terms
1
Lj1g3v3330210.1
– Cytoplasmic tRNA 2-thiolation protein [Medicago truncatula] gi|357467587|ref|XP_003604078.1|
GO terms
3
Lj1g3v4251230.2
– PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cicer arietinum] gi|502108809|ref|XP_004493493.1|
GO terms
3
Lj3g3v0642560.1
– PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502155737|ref|XP_004510174.1|
GO terms
1
Lj3g3v3348650.1
– PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi|502080886|ref|XP_004486713.1|
GO terms
4
Lj3g3v3599450.1
– PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502144299|ref|XP_004505648.1|
GO terms
1
Lj3g3v3627890.1
– PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] gi|356543424|ref|XP_003540160.1|
GO terms
1
Lj4g3v1218370.1
– PREDICTED: tyrosine--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502165730|ref|XP_004513672.1|
GO terms
1
Lj6g3v1445620.1
– PREDICTED: isoleucine--tRNA ligase-like [Cicer arietinum] gi|502085158|ref|XP_004487851.1|
GO terms
1
LotjaGi1g1v0247200_LC.1
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0247200_LC
GO terms
4
LotjaGi1g1v0306500.1
– Methionine-tRNA ligase, putative; TAIR: AT2G40660.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q9SVN5|SYMC_ARATH Methionine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1KB73|I1KB73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0306500
GO terms
1
LotjaGi1g1v0556900.1
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA 2-thiolation protein 1; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0556900.2
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|V7AXH9|V7AXH9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0556900.3
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA 2-thiolation protein 1; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0556900.4
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA 2-thiolation protein 1; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0673000.1
– Cytoplasmic tRNA 2-thiolation protein 2; TAIR: AT4G35910.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|O65628|CTU2_ARATH Cytoplasmic tRNA 2-thiolation protein 2; TrEMBL-Plants: tr|A0A072U1R0|A0A072U1R0_MEDTR Cytoplasmic tRNA 2-thiolation protein 2; Found in the gene: LotjaGi1g1v0673000
GO terms
3
LotjaGi1g1v0800700_LC.1
– Exportin-T; TAIR: AT1G72560.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q7PC79|XPOT_ARATH Exportin-T; TrEMBL-Plants: tr|A0A0S3RIV6|A0A0S3RIV6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800700_LC
GO terms
4
LotjaGi1g1v0800700_LC.2
– Exportin-T; TAIR: AT1G72560.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q7PC79|XPOT_ARATH Exportin-T; TrEMBL-Plants: tr|A0A0S3RIV6|A0A0S3RIV6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800700_LC
GO terms
4
LotjaGi2g1v0456000.1
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000
GO terms
4
LotjaGi2g1v0456000.3
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000
GO terms
4
LotjaGi2g1v0456000.4
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|K7LSZ2|K7LSZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0456000
GO terms
4
LotjaGi3g1v0075100.1
– Glutamate--tRNA ligase; TAIR: AT5G64050.1 glutamate tRNA synthetase; Swiss-Prot: sp|Q9FEA2|SYEM_ARATH Glutamate--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7ALD7|V7ALD7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0075100
GO terms
1
LotjaGi3g1v0182400_LC.1
– Glutamate-tRNA ligase; TAIR: AT5G64050.1 glutamate tRNA synthetase; Swiss-Prot: sp|Q43794|SYE_TOBAC Glutamate--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151QX19|A0A151QX19_CAJCA Glutamyl-tRNA synthetase; Found in the gene: LotjaGi3g1v0182400_LC
GO terms
1
LotjaGi3g1v0508200.1
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200
GO terms
4
LotjaGi3g1v0508200.2
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200
GO terms
4
LotjaGi3g1v0535700.1
– Isoleucine-tRNA ligase; TAIR: AT4G10320.1 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|F4JLM5|SYIC_ARATH Isoleucine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|A0A0S3SEB7|A0A0S3SEB7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535700
GO terms
1
LotjaGi3g1v0538600.1
– Methionine-tRNA ligase, putative; TAIR: AT4G13780.1 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2SPF8|A0A0B2SPF8_GLYSO Putative methionine--tRNA ligase; Found in the gene: LotjaGi3g1v0538600
GO terms
1
LotjaGi3g1v0548700.1
– Methionine-tRNA ligase, putative; TAIR: AT3G59980.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|I3SGE2|I3SGE2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0548700
GO terms
1
LotjaGi3g1v0548700.2
– Methionine--tRNA ligase; TAIR: AT3G59980.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|P31230|AIMP1_MOUSE Aminoacyl tRNA synthase complex-interacting multifunctional protein 1; TrEMBL-Plants: tr|I3SGE2|I3SGE2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0548700
GO terms
1
LotjaGi5g1v0089800.1
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800
GO terms
4
LotjaGi5g1v0089800.2
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800
GO terms
4
LotjaGi5g1v0089800.3
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800
GO terms
4
LotjaGi5g1v0089800.4
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800
GO terms
4
LotjaGi6g1v0249900.1
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
GO terms
1
LotjaGi6g1v0249900.2
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
GO terms
1
LotjaGi6g1v0249900.3
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
GO terms
1
LotjaGi6g1v0249900.4
– Isoleucine-tRNA ligase; TAIR: AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein; Swiss-Prot: sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072V611|A0A072V611_MEDTR Isoleucine-tRNA ligase; Found in the gene: LotjaGi6g1v0249900
GO terms
1
LotjaGi6g1v0336000.1
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000
GO terms
4
LotjaGi6g1v0336000.2
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000
GO terms
4
LotjaGi6g1v0336000.3
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000
GO terms
4
LotjaGi6g1v0336000.4
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000
GO terms
4
LotjaGi6g1v0336000.5
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7MVE7|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000
GO terms
4
LotjaGi6g1v0336000.6
– Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7HX04|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0043039
Biological process TRNA aminoacylation 1 2.17