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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0005049 |
| Transcript ID | Lj0g3v0005049.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | lipoxygenase [Sesbania rostrata] gi|14589309|emb|CAC43237.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 81 | 81 | 0 | – | |
| PANTHER | 1 | 81 | 81 | 0 | ||
| ProSiteProfiles | 1 | 633 | 633 | 255.184 | ||
| SUPERFAMILY | 2 | 632 | 631 | 9.81E-239 | ||
| Gene3D | 2 | 59 | 58 | 3.90E-17 | – | |
| Pfam | 2 | 616 | 615 | 4.70E-282 | ||
| PRINTS | 3 | 22 | 20 | 9.90E-44 | ||
| Gene3D | 60 | 149 | 90 | 1.10E-25 | ||
| PRINTS | 71 | 92 | 22 | 9.90E-44 | ||
| PANTHER | 115 | 633 | 519 | 0 | – | |
| PANTHER | 115 | 633 | 519 | 0 | ||
| PRINTS | 118 | 134 | 17 | 9.90E-44 | ||
| Gene3D | 151 | 283 | 133 | 4.50E-51 | – | |
| PRINTS | 157 | 176 | 20 | 9.90E-44 | ||
| PRINTS | 224 | 248 | 25 | 9.90E-44 | ||
| PRINTS | 269 | 286 | 18 | 5.10E-20 | ||
| Gene3D | 285 | 632 | 348 | 1.40E-140 | – | |
| ProSitePatterns | 287 | 301 | 15 | – | ||
| PRINTS | 287 | 304 | 18 | 5.10E-20 | ||
| PRINTS | 307 | 327 | 21 | 5.10E-20 | ||
| ProSitePatterns | 314 | 324 | 11 | – | ||
| PRINTS | 545 | 559 | 15 | 9.90E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0005049.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0005049.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.