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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020833
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 40 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.790s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0005049.1
n.a. lipoxygenase [Sesbania rostrata] gi|14589309|emb|CAC43237.1| chr0 1921954 1927267 +
2 domain predictions
3 GO terms
Lj0g3v0057299.2
n.a. Lipoxygenase [Medicago truncatula] gi|357441685|ref|XP_003591120.1| chr0 18781339 18782397 +
2 domain predictions
3 GO terms
Lj0g3v0092489.1
n.a. PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cicer arietinum] gi|502148324|ref|XP_004507121.1| chr0 38520229 38525554 +
2 domain predictions
3 GO terms
Lj0g3v0112509.1
n.a. PREDICTED: LOW QUALITY PROTEIN: linoleate 9S-lipoxygenase 6-like [Glycine max] gi|356560677|ref|XP_003548616.1| chr0 49019382 49020218 -
2 domain predictions
3 GO terms
Lj0g3v0126519.1
n.a. lipoxygenase [Pisum sativum] gi|2459611|gb|AAB71759.1| chr0 56914858 56916061 +
2 domain predictions
3 GO terms
Lj0g3v0177819.1
n.a. lipoxygenase [Corylus avellana] gi|16904543|emb|CAD10740.1| chr0 86081838 86084822 -
2 domain predictions
3 GO terms
Lj0g3v0209939.1
n.a. PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Glycine max] gi|356575019|ref|XP_003555640.1| chr0 105414019 105415622 -
2 domain predictions
3 GO terms
Lj0g3v0255679.1
n.a. Seed lipoxygenase [Medicago truncatula] gi|357513825|ref|XP_003627201.1| chr0 132789275 132795560 +
2 domain predictions
3 GO terms
Lj3g3v0324640.1
n.a. PREDICTED: seed linoleate 9S-lipoxygenase-2-like [Cicer arietinum] gi|502081408|ref|XP_004486858.1| chr3 2622556 2626069 -
2 domain predictions
3 GO terms
Lj3g3v2576900.1
n.a. lipoxygenase [Sesbania rostrata] gi|14589309|emb|CAC43237.1| chr3 31925380 31933956 +
2 domain predictions
3 GO terms
Lj3g3v2659870.1
n.a. lipoxygenase [Pisum sativum] gi|2459611|gb|AAB71759.1| chr3 32364386 32369893 -
2 domain predictions
3 GO terms
Lj3g3v2661200.1
n.a. lipoxygenase [Pisum sativum] gi|2459611|gb|AAB71759.1| chr3 32405082 32410397 +
2 domain predictions
3 GO terms
Lj3g3v3281570.1
n.a. PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Glycine max] gi|356538919|ref|XP_003537948.1| chr3 40233726 40242640 +
2 domain predictions
3 GO terms
Lj4g3v2528130.1
n.a. PREDICTED: lipoxygenase 6, choloroplastic-like [Glycine max] gi|356525142|ref|XP_003531186.1| chr4 34115412 34122355 -
2 domain predictions
3 GO terms
Lj5g3v2056200.1
n.a. Lipoxygenase [Medicago truncatula] gi|357444265|ref|XP_003592410.1| chr5 29547484 29556567 -
2 domain predictions
3 GO terms
Lj5g3v2056200.2
n.a. Lipoxygenase [Medicago truncatula] gi|357444265|ref|XP_003592410.1| chr5 29547484 29557946 -
2 domain predictions
3 GO terms
Lj6g3v1038780.1
n.a. PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Glycine max] gi|356550899|ref|XP_003543820.1| chr6 11614354 11616258 -
2 domain predictions
3 GO terms
LotjaGi1g1v0772900.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5; TrEMBL-Plants: tr|I1JRC2|I1JRC2_SOYBN Lipoxygenase; Found in the gene: LotjaGi1g1v0772900 LjG1.1_chr1 134586845 134595265 -
2 domain predictions
3 GO terms
LotjaGi3g1v0028300.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7IS30|G7IS30_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028300 LjG1.1_chr3 3094538 3099686 +
2 domain predictions
3 GO terms
LotjaGi3g1v0028600.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P14856|LOX2_PEA Seed linoleate 9S-lipoxygenase-2; TrEMBL-Plants: tr|G7IS29|G7IS29_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028600 LjG1.1_chr3 3146179 3152287 -
2 domain predictions
3 GO terms
LotjaGi3g1v0274700.1
n.a. Lipoxygenase; TAIR: AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic; TrEMBL-Plants: tr|I1JMA5|I1JMA5_SOYBN Lipoxygenase; Found in the gene: LotjaGi3g1v0274700 LjG1.1_chr3 54104923 54143847 -
2 domain predictions
3 GO terms
LotjaGi3g1v0413600.1
n.a. Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 LjG1.1_chr3 81805539 81811833 +
2 domain predictions
3 GO terms
LotjaGi3g1v0413600.2
n.a. Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 LjG1.1_chr3 81805832 81810912 +
2 domain predictions
3 GO terms
LotjaGi3g1v0419600.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|O24470|O24470_PEA Lipoxygenase; Found in the gene: LotjaGi3g1v0419600 LjG1.1_chr3 82699287 82706307 +
2 domain predictions
3 GO terms
LotjaGi3g1v0419800.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|A0A072TLZ7|A0A072TLZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0419800 LjG1.1_chr3 82732005 82740140 +
2 domain predictions
3 GO terms
LotjaGi3g1v0419800.2
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|A0A151T9A0|A0A151T9A0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0419800 LjG1.1_chr3 82732189 82739942 +
2 domain predictions
3 GO terms
LotjaGi3g1v0420000.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420000 LjG1.1_chr3 82781887 82787226 +
2 domain predictions
3 GO terms
LotjaGi3g1v0420100.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420100 LjG1.1_chr3 82793748 82799532 +
2 domain predictions
3 GO terms
LotjaGi3g1v0420400.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P38414|LOX1_LENCU Linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|I1KUQ6|I1KUQ6_SOYBN Lipoxygenase; Found in the gene: LotjaGi3g1v0420400 LjG1.1_chr3 82831101 82837402 +
2 domain predictions
3 GO terms
LotjaGi3g1v0420500.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7LI99|G7LI99_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420500 LjG1.1_chr3 82851111 82857611 +
2 domain predictions
3 GO terms
LotjaGi3g1v0420800.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09186|LOX3_SOYBN Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7LI99|G7LI99_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420800 LjG1.1_chr3 82927325 82937329 +
2 domain predictions
3 GO terms
LotjaGi3g1v0496800.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMH0|A0A151TMH0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496800 LjG1.1_chr3 91485904 91496522 +
2 domain predictions
3 GO terms
LotjaGi3g1v0496800.2
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMH0|A0A151TMH0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496800 LjG1.1_chr3 91491837 91496234 +
2 domain predictions
3 GO terms
LotjaGi3g1v0496900.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMJ6|A0A151TMJ6_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496900 LjG1.1_chr3 91530645 91540490 +
2 domain predictions
3 GO terms
LotjaGi5g1v0221100.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5; TrEMBL-Plants: tr|V7BGT3|V7BGT3_PHAVU Lipoxygenase; Found in the gene: LotjaGi5g1v0221100 LjG1.1_chr5 52736165 52742900 +
2 domain predictions
3 GO terms
LotjaGi5g1v0314800.2
n.a. Lipoxygenase; TAIR: AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic; TrEMBL-Plants: tr|I1LE57|I1LE57_SOYBN Lipoxygenase; Found in the gene: LotjaGi5g1v0314800 LjG1.1_chr5 63295674 63297309 -
2 domain predictions
3 GO terms
LotjaGi5g1v0314800.3
n.a. Lipoxygenase; TAIR: AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic; TrEMBL-Plants: tr|G7ID71|G7ID71_MEDTR Lipoxygenase; Found in the gene: LotjaGi5g1v0314800 LjG1.1_chr5 63295674 63303438 -
2 domain predictions
3 GO terms
LotjaGi6g1v0195200.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A072VA97|A0A072VA97_MEDTR Linoleate 13S-lipoxygenase 2-1, related protein; Found in the gene: LotjaGi6g1v0195200 LjG1.1_chr6 49165524 49170618 +
2 domain predictions
3 GO terms
LotjaGi6g1v0195300.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A0B2SQ26|A0A0B2SQ26_GLYSO Lipoxygenase; Found in the gene: LotjaGi6g1v0195300 LjG1.1_chr6 49178510 49180488 +
2 domain predictions
3 GO terms
LotjaGi6g1v0195700.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A072VA97|A0A072VA97_MEDTR Linoleate 13S-lipoxygenase 2-1, related protein; Found in the gene: LotjaGi6g1v0195700 LjG1.1_chr6 49197074 49200191 -
2 domain predictions
3 GO terms