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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0008909 |
| Transcript ID | Lj0g3v0008909.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | hexose transporter 1 [Juglans regia] gi|68271836|gb|AAY89231.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 33 | 33 | – | – | |
| PANTHER | 25 | 375 | 351 | 9.90E-130 | – | |
| PANTHER | 25 | 375 | 351 | 9.90E-130 | – | |
| TMHMM | 34 | 56 | 23 | – | – | |
| ProSiteProfiles | 34 | 375 | 342 | 23.458 | ||
| Phobius | 34 | 55 | 22 | – | – | |
| SUPERFAMILY | 35 | 245 | 211 | 2.35E-25 | ||
| Pfam | 37 | 369 | 333 | 3.80E-54 | ||
| PRINTS | 42 | 52 | 11 | 5.10E-13 | ||
| Gene3D | 54 | 228 | 175 | 1.80E-16 | – | |
| Phobius | 56 | 84 | 29 | – | – | |
| Phobius | 85 | 105 | 21 | – | – | |
| TMHMM | 86 | 105 | 20 | – | – | |
| Phobius | 106 | 111 | 6 | – | – | |
| CDD | 111 | 227 | 117 | 1.84E-09 | ||
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 112 | 131 | 20 | – | – | |
| Phobius | 132 | 136 | 5 | – | – | |
| Phobius | 137 | 156 | 20 | – | – | |
| TMHMM | 138 | 155 | 18 | – | – | |
| PRINTS | 142 | 161 | 20 | 5.10E-13 | ||
| ProSitePatterns | 147 | 172 | 26 | – | ||
| Phobius | 157 | 176 | 20 | – | – | |
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 177 | 198 | 22 | – | – | |
| Phobius | 199 | 217 | 19 | – | – | |
| TMHMM | 217 | 239 | 23 | – | – | |
| Phobius | 218 | 241 | 24 | – | – | |
| Phobius | 242 | 297 | 56 | – | – | |
| SUPERFAMILY | 272 | 366 | 95 | 2.35E-25 | ||
| PRINTS | 296 | 306 | 11 | 5.10E-13 | ||
| TMHMM | 298 | 317 | 20 | – | – | |
| Phobius | 298 | 317 | 20 | – | – | |
| Phobius | 318 | 322 | 5 | – | – | |
| TMHMM | 322 | 341 | 20 | – | – | |
| Phobius | 323 | 341 | 19 | – | – | |
| ProSitePatterns | 337 | 354 | 18 | – | ||
| Phobius | 342 | 352 | 11 | – | – | |
| TMHMM | 348 | 370 | 23 | – | – | |
| Phobius | 353 | 374 | 22 | – | – | |
| Phobius | 375 | 375 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0008909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0008909.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.