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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0009279 |
| Transcript ID | Lj0g3v0009279.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine max] gi|356506460|ref|XP_003522000.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 87 | 87 | – | – | |
| PANTHER | 1 | 463 | 463 | 0 | – | |
| PANTHER | 1 | 463 | 463 | 0 | – | |
| CDD | 6 | 444 | 439 | 7.07E-152 | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| TIGRFAM | 16 | 415 | 400 | 1.20E-63 | ||
| Pfam | 16 | 176 | 161 | 8.60E-36 | ||
| TMHMM | 45 | 67 | 23 | – | – | |
| TMHMM | 88 | 107 | 20 | – | – | |
| Phobius | 88 | 106 | 19 | – | – | |
| Phobius | 107 | 125 | 19 | – | – | |
| Phobius | 126 | 143 | 18 | – | – | |
| Phobius | 144 | 154 | 11 | – | – | |
| Phobius | 155 | 176 | 22 | – | – | |
| TMHMM | 158 | 180 | 23 | – | – | |
| Phobius | 177 | 187 | 11 | – | – | |
| TMHMM | 187 | 209 | 23 | – | – | |
| Phobius | 188 | 209 | 22 | – | – | |
| Phobius | 210 | 229 | 20 | – | – | |
| TMHMM | 229 | 251 | 23 | – | – | |
| Phobius | 230 | 251 | 22 | – | – | |
| Pfam | 239 | 401 | 163 | 9.60E-36 | ||
| Phobius | 252 | 270 | 19 | – | – | |
| Phobius | 271 | 292 | 22 | – | – | |
| TMHMM | 272 | 294 | 23 | – | – | |
| Phobius | 293 | 312 | 20 | – | – | |
| TMHMM | 309 | 331 | 23 | – | – | |
| Phobius | 313 | 333 | 21 | – | – | |
| Phobius | 334 | 344 | 11 | – | – | |
| Phobius | 345 | 366 | 22 | – | – | |
| Phobius | 367 | 386 | 20 | – | – | |
| TMHMM | 385 | 407 | 23 | – | – | |
| Phobius | 387 | 407 | 21 | – | – | |
| Phobius | 408 | 412 | 5 | – | – | |
| TMHMM | 412 | 434 | 23 | – | – | |
| Phobius | 413 | 434 | 22 | – | – | |
| Phobius | 435 | 468 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0009279.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0009279.1, powered by CORGI.
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