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Lj0g3v0032159.1

Overview

Field Value
Gene ID Lj0g3v0032159
Transcript ID Lj0g3v0032159.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable beta-D-xylosidase 7-like [Cicer arietinum] gi|502166228|ref|XP_004513829.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR30620:SF8
1 452 452 8.00E-234 –
Gene3D
G3DSA:3.20.20.300
1 50 50 1.20E-04
IPR001764
PANTHER
PTHR30620
1 452 452 8.00E-234
IPR026892
SUPERFAMILY
SSF51445
2 76 75 8.11E-05
IPR017853
Gene3D
G3DSA:3.40.50.1700
64 310 247 7.10E-61
IPR002772
SUPERFAMILY
SSF52279
78 311 234 3.40E-49
IPR002772
Pfam
PF01915
78 308 231 8.10E-54
IPR002772
SMART
SM01217
375 445 71 3.40E-13
IPR026891
Pfam
PF14310
377 443 67 3.80E-11
IPR026891

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj0g3v0032159.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0032159.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.