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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026891
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.376s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0032159.1
n.a. PREDICTED: probable beta-D-xylosidase 7-like [Cicer arietinum] gi|502166228|ref|XP_004513829.1| chr0 10127026 10132736 +
3 domain predictions
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Lj0g3v0105959.1
n.a. PREDICTED: probable beta-D-xylosidase 7-like [Cicer arietinum] gi|502166228|ref|XP_004513829.1| chr0 45600352 45606111 -
3 domain predictions
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Lj1g3v4862960.1
n.a. Beta-xylosidase [Medicago truncatula] gi|357511337|ref|XP_003625957.1| chr1 58852309 58864087 +
3 domain predictions
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Lj2g3v1468060.1
n.a. PREDICTED: probable beta-D-xylosidase 6-like [Cicer arietinum] gi|502162573|ref|XP_004512546.1| chr2 23297139 23300524 -
3 domain predictions
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Lj3g3v2385560.1
n.a. n.a. chr3 29690217 29694417 -
3 domain predictions
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Lj4g3v0336900.1
n.a. PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Glycine max] gi|356524862|ref|XP_003531047.1| chr4 4229083 4229544 -
3 domain predictions
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Lj4g3v0338070.1
n.a. PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Glycine max] gi|356525896|ref|XP_003531557.1| chr4 4263471 4264081 -
3 domain predictions
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Lj5g3v1600680.3
n.a. PREDICTED: probable beta-D-xylosidase 2-like [Glycine max] gi|356501877|ref|XP_003519750.1| chr5 23127739 23151656 +
3 domain predictions
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Lj5g3v2099530.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like [Glycine max] gi|356574315|ref|XP_003555294.1| chr5 30033049 30036686 -
3 domain predictions
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Lj6g3v1538120.1
n.a. PREDICTED: beta-D-xylosidase 1-like [Glycine max] gi|356556038|ref|XP_003546334.1| chr6 17685878 17690758 -
3 domain predictions
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LotjaGi1g1v0147600.1
n.a. Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|A0A1J7HJ40|A0A1J7HJ40_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0147600 LjG1.1_chr1 25222892 25228713 +
3 domain predictions
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LotjaGi1g1v0245600.1
n.a. Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|G8A378|G8A378_MEDTR Glycoside hydrolase family 3 amino-terminal domain protein; Found in the gene: LotjaGi1g1v0245600 LjG1.1_chr1 58936621 58943674 +
3 domain predictions
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LotjaGi1g1v0270900_LC.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi1g1v0270900_LC LjG1.1_chr1 66086850 66087874 +
3 domain predictions
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LotjaGi1g1v0760700.1
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133377778 133384869 +
3 domain predictions
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LotjaGi1g1v0760700.2
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133377899 133384681 +
3 domain predictions
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LotjaGi1g1v0760700.3
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133378039 133384244 +
3 domain predictions
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LotjaGi1g1v0760700.4
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133380516 133384244 +
3 domain predictions
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LotjaGi2g1v0103700_LC.1
n.a. Beta xylosidase; TAIR: AT3G19620.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5; TrEMBL-Plants: tr|K7N397|K7N397_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0103700_LC LjG1.1_chr2 34798145 34807129 -
2 domain predictions
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LotjaGi2g1v0103700_LC.2
n.a. Beta xylosidase; TAIR: AT3G19620.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5; TrEMBL-Plants: tr|K7N397|K7N397_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0103700_LC LjG1.1_chr2 34798346 34807113 -
2 domain predictions
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LotjaGi2g1v0103700_LC.3
n.a. Beta xylosidase; TAIR: AT3G19620.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5; TrEMBL-Plants: tr|K7N397|K7N397_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0103700_LC LjG1.1_chr2 34803968 34807106 -
2 domain predictions
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LotjaGi2g1v0331000.1
n.a. Beta xylosidase; TAIR: AT5G10560.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6; TrEMBL-Plants: tr|G7KF67|G7KF67_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi2g1v0331000 LjG1.1_chr2 80664299 80667710 -
3 domain predictions
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LotjaGi4g1v0033200.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr|A0A072UQA9|A0A072UQA9_MEDTR Beta-xylosidase/alpha-L-arabinofuranosidase-like protein; Found in the gene: LotjaGi4g1v0033200 LjG1.1_chr4 4043168 4050216 -
3 domain predictions
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LotjaGi4g1v0033200.2
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr|A0A0R0IPH2|A0A0R0IPH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0033200 LjG1.1_chr4 4043848 4049029 -
3 domain predictions
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LotjaGi5g1v0246000.1
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|I1JBG9|I1JBG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 LjG1.1_chr5 55417280 55421361 +
3 domain predictions
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LotjaGi5g1v0246000.2
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|P83344|XYNB_PRUPE Putative beta-D-xylosidase; TrEMBL-Plants: tr|A0A0R0HT51|A0A0R0HT51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 LjG1.1_chr5 55417478 55421386 +
3 domain predictions
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LotjaGi5g1v0322400.1
n.a. Beta xylosidase; TAIR: AT3G19620.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5; TrEMBL-Plants: tr|K7N397|K7N397_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0322400 LjG1.1_chr5 64092631 64096564 -
3 domain predictions
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LotjaGi6g1v0256100.1
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56891281 56898246 -
3 domain predictions
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LotjaGi6g1v0256100.2
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56891640 56898048 -
3 domain predictions
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LotjaGi6g1v0354900.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66674548 66682182 +
3 domain predictions
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LotjaGi6g1v0354900.2
n.a. Beta xylosidase; TAIR: AT5G09730.1 beta-xylosidase 3; Swiss-Prot: sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3; TrEMBL-Plants: tr|I1KR53|I1KR53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66675314 66679613 +
3 domain predictions
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LotjaGi6g1v0354900.3
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66675339 66679613 +
3 domain predictions
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