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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002772
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 64 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.270s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0032159.1
n.a. PREDICTED: probable beta-D-xylosidase 7-like [Cicer arietinum] gi|502166228|ref|XP_004513829.1| chr0 10127026 10132736 +
4 domain predictions
2 GO terms
Lj0g3v0032179.1
n.a. PREDICTED: probable beta-D-xylosidase 7-like [Glycine max] gi|356552866|ref|XP_003544783.1| chr0 10128935 10132370 +
4 domain predictions
2 GO terms
Lj0g3v0105959.1
n.a. PREDICTED: probable beta-D-xylosidase 7-like [Cicer arietinum] gi|502166228|ref|XP_004513829.1| chr0 45600352 45606111 -
4 domain predictions
2 GO terms
Lj0g3v0132459.1
n.a. Beta-D-glucosidase [Medicago truncatula] gi|357462137|ref|XP_003601350.1| chr0 60448769 60453460 +
4 domain predictions
2 GO terms
Lj0g3v0178889.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Cicer arietinum] gi|502095944|ref|XP_004490576.1| chr0 86803679 86805836 -
4 domain predictions
2 GO terms
Lj0g3v0213889.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like [Glycine max] gi|356574315|ref|XP_003555294.1| chr0 108186101 108188856 -
4 domain predictions
2 GO terms
Lj0g3v0305169.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Glycine max] gi|356555871|ref|XP_003546253.1| chr0 159022810 159029458 +
4 domain predictions
2 GO terms
Lj0g3v0321239.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Cicer arietinum] gi|502091998|ref|XP_004489688.1| chr0 167699017 167703584 +
4 domain predictions
2 GO terms
Lj0g3v0321249.1
n.a. Glycosyl hydrolase family protein isoform 1 [Theobroma cacao] gi|508785941|gb|EOY33197.1| chr0 167703234 167704104 +
4 domain predictions
2 GO terms
Lj1g3v3975550.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Glycine max] gi|356560373|ref|XP_003548467.1| chr1 46876660 46881223 -
4 domain predictions
2 GO terms
Lj1g3v3975550.2
n.a. PREDICTED: lysosomal beta glucosidase-like [Glycine max] gi|356560373|ref|XP_003548467.1| chr1 46876660 46881519 -
4 domain predictions
2 GO terms
Lj1g3v4862960.1
n.a. Beta-xylosidase [Medicago truncatula] gi|357511337|ref|XP_003625957.1| chr1 58852309 58864087 +
4 domain predictions
2 GO terms
Lj2g3v1468060.1
n.a. PREDICTED: probable beta-D-xylosidase 6-like [Cicer arietinum] gi|502162573|ref|XP_004512546.1| chr2 23297139 23300524 -
4 domain predictions
2 GO terms
Lj3g3v1403870.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Cicer arietinum] gi|502095944|ref|XP_004490576.1| chr3 17930834 17931747 -
4 domain predictions
2 GO terms
Lj4g3v0336910.1
n.a. PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Cicer arietinum] gi|502142062|ref|XP_004504774.1| chr4 4230456 4235427 -
4 domain predictions
2 GO terms
Lj4g3v0338090.1
n.a. PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Glycine max] gi|356558612|ref|XP_003547598.1| chr4 4264284 4268523 -
4 domain predictions
2 GO terms
Lj5g3v1600680.1
n.a. Beta xylosidase [Medicago truncatula] gi|357442285|ref|XP_003591420.1| chr5 23126702 23150859 +
4 domain predictions
2 GO terms
Lj5g3v1600680.3
n.a. PREDICTED: probable beta-D-xylosidase 2-like [Glycine max] gi|356501877|ref|XP_003519750.1| chr5 23127739 23151656 +
4 domain predictions
2 GO terms
Lj5g3v1600690.1
n.a. n.a. chr5 23149875 23151853 -
4 domain predictions
2 GO terms
Lj5g3v2099530.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like [Glycine max] gi|356574315|ref|XP_003555294.1| chr5 30033049 30036686 -
4 domain predictions
2 GO terms
Lj6g3v0607240.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Cicer arietinum] gi|502129232|ref|XP_004500232.1| chr6 6028731 6033816 -
4 domain predictions
2 GO terms
Lj6g3v1538120.1
n.a. PREDICTED: beta-D-xylosidase 1-like [Glycine max] gi|356556038|ref|XP_003546334.1| chr6 17685878 17690758 -
3 domain predictions
2 GO terms
Lj6g3v1538130.1
n.a. PREDICTED: beta-D-xylosidase 1-like [Cicer arietinum] gi|502084904|ref|XP_004487789.1| chr6 17686480 17692101 -
4 domain predictions
2 GO terms
Lj6g3v1801980.1
n.a. PREDICTED: lysosomal beta glucosidase-like [Glycine max] gi|356560373|ref|XP_003548467.1| chr6 20169005 20174586 -
4 domain predictions
2 GO terms
Lj6g3v1801980.2
n.a. PREDICTED: lysosomal beta glucosidase-like [Glycine max] gi|356560373|ref|XP_003548467.1| chr6 20169223 20174882 -
4 domain predictions
2 GO terms
Lj6g3v1801980.3
n.a. PREDICTED: lysosomal beta glucosidase-like [Glycine max] gi|356560373|ref|XP_003548467.1| chr6 20169223 20174882 -
4 domain predictions
2 GO terms
Lj6g3v2218790.1
n.a. PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Glycine max] gi|356558612|ref|XP_003547598.1| chr6 25884956 25889195 +
4 domain predictions
2 GO terms
LotjaGi1g1v0123200.2
n.a. Beta-glucosidase; TAIR: AT3G47000.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151RS31|A0A151RS31_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi1g1v0123200 LjG1.1_chr1 19510945 19519452 +
2 domain predictions
2 GO terms
LotjaGi1g1v0147600.1
n.a. Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|A0A1J7HJ40|A0A1J7HJ40_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0147600 LjG1.1_chr1 25222892 25228713 +
2 domain predictions
2 GO terms
LotjaGi1g1v0245600.1
n.a. Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|G8A378|G8A378_MEDTR Glycoside hydrolase family 3 amino-terminal domain protein; Found in the gene: LotjaGi1g1v0245600 LjG1.1_chr1 58936621 58943674 +
2 domain predictions
2 GO terms
LotjaGi1g1v0270900_LC.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi1g1v0270900_LC LjG1.1_chr1 66086850 66087874 +
2 domain predictions
2 GO terms
LotjaGi1g1v0644500.1
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|V7CXE8|V7CXE8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 LjG1.1_chr1 120173322 120179235 -
2 domain predictions
2 GO terms
LotjaGi1g1v0644500.2
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|I1ML01|I1ML01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 LjG1.1_chr1 120173322 120179235 -
2 domain predictions
2 GO terms
LotjaGi1g1v0644500.3
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|I1ML01|I1ML01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 LjG1.1_chr1 120174449 120178248 -
2 domain predictions
2 GO terms
LotjaGi1g1v0760700.1
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133377778 133384869 +
2 domain predictions
2 GO terms
LotjaGi1g1v0760700.2
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133377899 133384681 +
2 domain predictions
2 GO terms
LotjaGi1g1v0760700.3
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133378039 133384244 +
2 domain predictions
2 GO terms
LotjaGi1g1v0760700.4
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133380516 133384244 +
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.1
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264201 32269398 -
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.2
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264435 32268923 -
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.3
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0B0N5P6|A0A0B0N5P6_GOSAR GluA; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.4
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A1J7H173|A0A1J7H173_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.5
n.a. Beta-glucosidase-like protein; TAIR: AT5G20940.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A072UIE5|A0A072UIE5_MEDTR Beta-D-glucoside glucohydrolase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.6
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
2 domain predictions
2 GO terms
LotjaGi2g1v0098600.7
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
2 domain predictions
2 GO terms
LotjaGi2g1v0331000.1
n.a. Beta xylosidase; TAIR: AT5G10560.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6; TrEMBL-Plants: tr|G7KF67|G7KF67_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi2g1v0331000 LjG1.1_chr2 80664299 80667710 -
2 domain predictions
2 GO terms
LotjaGi4g1v0033200.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr|A0A072UQA9|A0A072UQA9_MEDTR Beta-xylosidase/alpha-L-arabinofuranosidase-like protein; Found in the gene: LotjaGi4g1v0033200 LjG1.1_chr4 4043168 4050216 -
2 domain predictions
2 GO terms
LotjaGi4g1v0033200.2
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr|A0A0R0IPH2|A0A0R0IPH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0033200 LjG1.1_chr4 4043848 4049029 -
2 domain predictions
2 GO terms
LotjaGi5g1v0246000.1
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|I1JBG9|I1JBG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 LjG1.1_chr5 55417280 55421361 +
2 domain predictions
2 GO terms
LotjaGi5g1v0246000.2
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|P83344|XYNB_PRUPE Putative beta-D-xylosidase; TrEMBL-Plants: tr|A0A0R0HT51|A0A0R0HT51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 LjG1.1_chr5 55417478 55421386 +
2 domain predictions
2 GO terms