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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0035419 |
| Transcript ID | Lj0g3v0035419.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max] gi|356515971|ref|XP_003526670.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 243 | 243 | 6.20E-138 | – | |
| PANTHER | 1 | 243 | 243 | 6.20E-138 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 6 | 27 | 22 | – | – | |
| Pfam | 7 | 94 | 88 | 2.20E-18 | ||
| Phobius | 28 | 38 | 11 | – | – | |
| Phobius | 39 | 59 | 21 | – | – | |
| TMHMM | 40 | 62 | 23 | – | – | |
| Phobius | 60 | 70 | 11 | – | – | |
| TMHMM | 67 | 86 | 20 | – | – | |
| Phobius | 71 | 92 | 22 | – | – | |
| Phobius | 93 | 98 | 6 | – | – | |
| Phobius | 99 | 123 | 25 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 124 | 128 | 5 | – | – | |
| Phobius | 129 | 153 | 25 | – | – | |
| Pfam | 130 | 213 | 84 | 1.80E-23 | ||
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 154 | 159 | 6 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 160 | 182 | 23 | – | – | |
| Phobius | 183 | 187 | 5 | – | – | |
| TMHMM | 187 | 209 | 23 | – | – | |
| Phobius | 188 | 209 | 22 | – | – | |
| Phobius | 210 | 247 | 38 | – | – | |
| MobiDBLite | 219 | 247 | 29 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0035419.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0035419.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.