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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004316
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We have found 39 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.510s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0035419.1
n.a. PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max] gi|356515971|ref|XP_003526670.1| chr0 11269543 11274666 -
2 domain predictions
1 GO term
Lj0g3v0107859.1
n.a. PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] gi|356544144|ref|XP_003540515.1| chr0 46533548 46534260 -
2 domain predictions
1 GO term
Lj0g3v0133529.1
n.a. PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max] gi|356515971|ref|XP_003526670.1| chr0 61122031 61124638 -
2 domain predictions
1 GO term
Lj0g3v0137939.1
n.a. PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max] gi|356515971|ref|XP_003526670.1| chr0 63278086 63278731 -
2 domain predictions
1 GO term
Lj0g3v0168879.1
n.a. N3 like protein [Medicago truncatula] gi|14715258|emb|CAC44123.1| chr0 80664115 80666311 +
2 domain predictions
1 GO term
Lj0g3v0288269.1
n.a. PREDICTED: bidirectional sugar transporter SWEET3-like [Glycine max] gi|356516019|ref|XP_003526694.1| chr0 149796068 149798116 +
2 domain predictions
1 GO term
Lj0g3v0313869.1
n.a. Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|358343709|ref|XP_003635940.1| chr0 163877588 163878409 -
2 domain predictions
1 GO term
Lj0g3v0313869.2
n.a. Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|358343709|ref|XP_003635940.1| chr0 163877588 163879345 -
2 domain predictions
1 GO term
Lj1g3v0948550.1
n.a. PREDICTED: bidirectional sugar transporter SWEET3-like [Cicer arietinum] gi|502124125|ref|XP_004498397.1| chr1 11865093 11867607 +
2 domain predictions
1 GO term
Lj1g3v1476250.1
n.a. PREDICTED: bidirectional sugar transporter SWEET12-like [Glycine max] gi|356516515|ref|XP_003526939.1| chr1 17574924 17577024 +
2 domain predictions
1 GO term
Lj1g3v3329770.1
n.a. PREDICTED: bidirectional sugar transporter N3-like [Glycine max] gi|356567308|ref|XP_003551863.1| chr1 37806349 37808211 -
2 domain predictions
1 GO term
Lj2g3v1014330.1
n.a. PREDICTED: bidirectional sugar transporter SWEET6b-like [Glycine max] gi|356571441|ref|XP_003553885.1| chr2 15559242 15561653 -
2 domain predictions
1 GO term
Lj3g3v3199790.1
n.a. PREDICTED: bidirectional sugar transporter SWEET14-like [Glycine max] gi|356507380|ref|XP_003522445.1| chr3 39492795 39495362 +
2 domain predictions
1 GO term
Lj4g3v0335860.1
n.a. PREDICTED: bidirectional sugar transporter N3-like [Cicer arietinum] gi|502095641|ref|XP_004490502.1| chr4 3866593 3867486 -
2 domain predictions
1 GO term
Lj4g3v2882250.1
n.a. PREDICTED: bidirectional sugar transporter SWEET15-like [Glycine max] gi|356527751|ref|XP_003532471.1| chr4 38611406 38613355 +
2 domain predictions
1 GO term
Lj4g3v3014410.1
n.a. PREDICTED: bidirectional sugar transporter SWEET4-like [Cicer arietinum] gi|502138950|ref|XP_004503589.1| chr4 40065004 40065703 -
2 domain predictions
1 GO term
Lj6g3v0204540.1
n.a. PREDICTED: bidirectional sugar transporter SWEET4-like [Glycine max] gi|356577487|ref|XP_003556856.1| chr6 1954223 1955493 +
2 domain predictions
1 GO term
LotjaGi1g1v0168400.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT1G21460.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1; TrEMBL-Plants: tr|A0A072VGC4|A0A072VGC4_MEDTR Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0168400 LjG1.1_chr1 31984075 31986954 -
2 domain predictions
1 GO term
LotjaGi1g1v0171700.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G53190.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q6NQN5|SWET3_ARATH Bidirectional sugar transporter SWEET3; TrEMBL-Plants: tr|I3SYF2|I3SYF2_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0171700 LjG1.1_chr1 32720486 32725226 +
2 domain predictions
1 GO term
LotjaGi1g1v0272400.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT1G21460.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1; TrEMBL-Plants: tr|I3S236|I3S236_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0272400 LjG1.1_chr1 66773692 66779797 -
2 domain predictions
1 GO term
LotjaGi1g1v0272500.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT1G21460.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1; TrEMBL-Plants: tr|I3S236|I3S236_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0272500 LjG1.1_chr1 66805768 66809393 -
2 domain predictions
1 GO term
LotjaGi1g1v0281200.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G53190.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q6NQN5|SWET3_ARATH Bidirectional sugar transporter SWEET3; TrEMBL-Plants: tr|V7AW98|V7AW98_PHAVU Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0281200 LjG1.1_chr1 68555761 68558225 -
2 domain predictions
1 GO term
LotjaGi1g1v0335200.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G50800.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9FGQ2|SWT13_ARATH Bidirectional sugar transporter SWEET13; TrEMBL-Plants: tr|A0A0B2QQU2|A0A0B2QQU2_GLYSO Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0335200 LjG1.1_chr1 79441881 79444174 +
2 domain predictions
1 GO term
LotjaGi1g1v0335500.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G50800.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9FGQ2|SWT13_ARATH Bidirectional sugar transporter SWEET13; TrEMBL-Plants: tr|V7B050|V7B050_PHAVU Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0335500 LjG1.1_chr1 79475037 79477480 +
2 domain predictions
1 GO term
LotjaGi1g1v0335600.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G50790.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9LUE3|SWT10_ARATH Bidirectional sugar transporter SWEET10; TrEMBL-Plants: tr|I1JXM9|I1JXM9_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0335600 LjG1.1_chr1 79505871 79508294 +
2 domain predictions
1 GO term
LotjaGi1g1v0547800.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT2G39060.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9FPN0|NEC1_PETHY Bidirectional sugar transporter NEC1; TrEMBL-Plants: tr|I3T4N0|I3T4N0_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0547800 LjG1.1_chr1 107783544 107786294 +
2 domain predictions
1 GO term
LotjaGi1g1v0555000.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G13170.1 senescence-associated gene 29; Swiss-Prot: sp|P93332|NOD3_MEDTR Bidirectional sugar transporter N3; TrEMBL-Plants: tr|I3SGB9|I3SGB9_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi1g1v0555000 LjG1.1_chr1 108723972 108725836 -
2 domain predictions
1 GO term
LotjaGi2g1v0247700.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G62850.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9FM10|SWET5_ARATH Bidirectional sugar transporter SWEET5; TrEMBL-Plants: tr|I3SYY9|I3SYY9_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi2g1v0247700 LjG1.1_chr2 71328407 71331411 -
2 domain predictions
1 GO term
LotjaGi3g1v0039100.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT3G14770.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9LH79|SWET2_ARATH Bidirectional sugar transporter SWEET2; TrEMBL-Plants: tr|I1MI63|I1MI63_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi3g1v0039100 LjG1.1_chr3 4191379 4196973 -
2 domain predictions
1 GO term
LotjaGi3g1v0039100.2
n.a. Bidirectional sugar transporter SWEET; TAIR: AT3G14770.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9LH79|SWET2_ARATH Bidirectional sugar transporter SWEET2; TrEMBL-Plants: tr|I1MI63|I1MI63_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi3g1v0039100 LjG1.1_chr3 4191700 4196950 -
2 domain predictions
1 GO term
LotjaGi3g1v0084300.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G13170.1 senescence-associated gene 29; Swiss-Prot: sp|Q9FY94|SWT15_ARATH Bidirectional sugar transporter SWEET15; TrEMBL-Plants: tr|A0A0B2QTK0|A0A0B2QTK0_GLYSO Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi3g1v0084300 LjG1.1_chr3 9487132 9489266 +
2 domain predictions
1 GO term
LotjaGi3g1v0304400.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT3G14770.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9LH79|SWET2_ARATH Bidirectional sugar transporter SWEET2; TrEMBL-Plants: tr|I3T8J6|I3T8J6_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi3g1v0304400 LjG1.1_chr3 63957260 63960062 -
2 domain predictions
1 GO term
LotjaGi4g1v0029600.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G13170.1 senescence-associated gene 29; Swiss-Prot: sp|P93332|NOD3_MEDTR Bidirectional sugar transporter N3; TrEMBL-Plants: tr|K7KPT8|K7KPT8_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi4g1v0029600 LjG1.1_chr4 3656028 3658906 -
2 domain predictions
1 GO term
LotjaGi4g1v0177400_LC.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT4G10850.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q8LBF7|SWET7_ARATH Bidirectional sugar transporter SWEET7; TrEMBL-Plants: tr|A0A072TWK5|A0A072TWK5_MEDTR Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi4g1v0177400_LC LjG1.1_chr4 36192421 36193252 -
2 domain predictions
1 GO term
LotjaGi4g1v0235800.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G62850.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9FM10|SWET5_ARATH Bidirectional sugar transporter SWEET5; TrEMBL-Plants: tr|K7KMP6|K7KMP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0235800 LjG1.1_chr4 55038379 55040639 -
2 domain predictions
1 GO term
LotjaGi4g1v0419400.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G50800.1 Nodulin MtN3 family protein; Swiss-Prot: sp|B8BKP4|SWT14_ORYSI Bidirectional sugar transporter SWEET14; TrEMBL-Plants: tr|I3T803|I3T803_LOTJA Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi4g1v0419400 LjG1.1_chr4 79493322 79496318 -
2 domain predictions
1 GO term
LotjaGi4g1v0419500.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G23660.1 bidirectional sugar transporter SWEET12-like protein; Swiss-Prot: sp|B8BKP4|SWT14_ORYSI Bidirectional sugar transporter SWEET14; TrEMBL-Plants: tr|I1KP47|I1KP47_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi4g1v0419500 LjG1.1_chr4 79504873 79506993 -
2 domain predictions
1 GO term
LotjaGi4g1v0437500.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT4G10850.1 Nodulin MtN3 family protein; Swiss-Prot: sp|A2X3S3|SWET4_ORYSI Bidirectional sugar transporter SWEET4; TrEMBL-Plants: tr|A0A072TWK5|A0A072TWK5_MEDTR Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi4g1v0437500 LjG1.1_chr4 81038629 81042586 -
2 domain predictions
1 GO term
LotjaGi6g1v0355900_LC.1
n.a. Bidirectional sugar transporter SWEET; TAIR: AT5G13170.1 senescence-associated gene 29; Swiss-Prot: sp|P0DKJ5|SWT15_VITVI Bidirectional sugar transporter SWEET15; TrEMBL-Plants: tr|I1KR79|I1KR79_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi6g1v0355900_LC LjG1.1_chr6 66754808 66757036 -
2 domain predictions
1 GO term