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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0050259 |
| Transcript ID | Lj0g3v0050259.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: magnesium transporter NIPA2-like [Glycine max] gi|356512886|ref|XP_003525145.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 342 | 342 | 1.90E-262 | ||
| PANTHER | 1 | 342 | 342 | 1.90E-262 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Pfam | 5 | 295 | 291 | 2.30E-125 | ||
| TMHMM | 5 | 24 | 20 | – | – | |
| Phobius | 6 | 25 | 20 | – | – | |
| Phobius | 26 | 44 | 19 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| Phobius | 45 | 66 | 22 | – | – | |
| SUPERFAMILY | 51 | 123 | 73 | 2.35E-08 | – | |
| Phobius | 67 | 71 | 5 | – | – | |
| Phobius | 72 | 98 | 27 | – | – | |
| TMHMM | 76 | 98 | 23 | – | – | |
| Phobius | 99 | 104 | 6 | – | – | |
| TMHMM | 105 | 124 | 20 | – | – | |
| Phobius | 105 | 125 | 21 | – | – | |
| Phobius | 126 | 144 | 19 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 145 | 165 | 21 | – | – | |
| Phobius | 166 | 171 | 6 | – | – | |
| Phobius | 172 | 196 | 25 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 197 | 207 | 11 | – | – | |
| Phobius | 208 | 230 | 23 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Phobius | 231 | 236 | 6 | – | – | |
| Phobius | 237 | 262 | 26 | – | – | |
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 263 | 345 | 83 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0050259.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0050259.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.