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Lj0g3v0057569.1

Overview

Field Value
Gene ID Lj0g3v0057569
Transcript ID Lj0g3v0057569.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: F-box protein At1g67340-like [Glycine max] gi|356525160|ref|XP_003531195.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
34 53 20 – –
PANTHER
PTHR12298
41 226 186 2.90E-106 –
PANTHER
PTHR12298:SF7
41 226 186 2.90E-106 –
SUPERFAMILY
SSF81383
42 107 66 3.40E-07
IPR001810
Gene3D
G3DSA:1.20.1280.50
50 92 43 3.70E-05 –
SUPERFAMILY
SSF81901
116 225 110 3.53E-12 –
Gene3D
G3DSA:1.25.40.10
116 223 108 1.10E-15
IPR011990

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0057569.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0057569.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.