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Lj0g3v0063229.1

Overview

Field Value
Gene ID Lj0g3v0063229
Transcript ID Lj0g3v0063229.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Glycine max] gi|356555754|ref|XP_003546195.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12215
1 277 277 9.80E-88 –
PANTHER
PTHR12215:SF10
1 277 277 9.80E-88 –
SUPERFAMILY
SSF56214
5 107 103 2.35E-19
IPR008278
Gene3D
G3DSA:3.90.470.20
6 129 124 4.40E-34
IPR008278
Pfam
PF01648
116 225 110 1.30E-15
IPR008278
SUPERFAMILY
SSF56214
116 231 116 1.09E-17
IPR008278
Gene3D
G3DSA:3.90.470.20
130 226 97 1.80E-21
IPR008278

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0008897
Molecular function Holo-[acyl-carrier-protein] synthase activity Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj0g3v0063229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0063229.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.