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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0065209 |
| Transcript ID | Lj0g3v0065209.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | aquaporin 2 [Samanea saman] gi|3158476|gb|AAC17529.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 272 | 272 | 2.10E-214 | – | |
| Phobius | 1 | 40 | 40 | – | – | |
| PANTHER | 1 | 272 | 272 | 2.10E-214 | ||
| Gene3D | 11 | 272 | 262 | 2.60E-93 | ||
| Pfam | 31 | 266 | 236 | 2.80E-85 | ||
| SUPERFAMILY | 31 | 271 | 241 | 1.27E-67 | ||
| CDD | 39 | 269 | 231 | 1.04E-75 | ||
| PRINTS | 39 | 58 | 20 | 8.00E-72 | ||
| TMHMM | 40 | 62 | 23 | – | – | |
| Phobius | 41 | 62 | 22 | – | – | |
| TIGRFAM | 43 | 266 | 224 | 1.90E-65 | ||
| Phobius | 63 | 81 | 19 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 82 | 104 | 23 | – | – | |
| PRINTS | 87 | 111 | 25 | 8.00E-72 | ||
| Phobius | 105 | 124 | 20 | – | – | |
| ProSitePatterns | 105 | 113 | 9 | – | ||
| TMHMM | 120 | 142 | 23 | – | – | |
| PRINTS | 124 | 143 | 20 | 8.00E-72 | ||
| Phobius | 125 | 146 | 22 | – | – | |
| Phobius | 147 | 165 | 19 | – | – | |
| TMHMM | 164 | 186 | 23 | – | – | |
| Phobius | 166 | 188 | 23 | – | – | |
| PRINTS | 173 | 191 | 19 | 8.00E-72 | ||
| Phobius | 189 | 199 | 11 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 200 | 222 | 23 | – | – | |
| PRINTS | 209 | 231 | 23 | 8.00E-72 | ||
| Phobius | 223 | 248 | 26 | – | – | |
| TMHMM | 248 | 270 | 23 | – | – | |
| Phobius | 249 | 270 | 22 | – | – | |
| PRINTS | 249 | 269 | 21 | 8.00E-72 | ||
| Phobius | 271 | 287 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0065209.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0065209.1, powered by CORGI.
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