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Lj0g3v0071509.1

Overview

Field Value
Gene ID Lj0g3v0071509
Transcript ID Lj0g3v0071509.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max] gi|356525096|ref|XP_003531163.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32133:SF89
31 225 195 2.90E-53 –
PANTHER
PTHR32133
31 225 195 2.90E-53 –
ProSiteProfiles
PS50181
42 88 47 12.067
IPR001810
Pfam
PF00646
46 82 37 2.00E-09
IPR001810
Gene3D
G3DSA:1.20.1280.50
47 81 35 6.90E-10 –
SUPERFAMILY
SSF81383
47 95 49 2.22E-15
IPR001810
SMART
SM00256
48 88 41 2.50E-09
IPR001810
SUPERFAMILY
SSF50965
101 235 135 7.06E-05
IPR011043
SUPERFAMILY
SSF81383
130 173 44 2.22E-15
IPR001810

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj0g3v0071509.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0071509.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.