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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0074359 |
| Transcript ID | Lj0g3v0074359.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | photosystem I subunit X precursor [Retama raetam] gi|16930767|gb|AAL32043.1|AF439284_1 |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 53 | 53 | – | – | |
| PANTHER | 1 | 78 | 78 | 8.30E-41 | – | |
| PANTHER | 1 | 78 | 78 | 8.30E-41 | – | |
| Gene3D | 47 | 78 | 32 | 5.00E-11 | ||
| Pfam | 52 | 77 | 26 | 2.40E-05 | ||
| Phobius | 54 | 71 | 18 | – | – | |
| Phobius | 72 | 78 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Photosystem I | A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation). | ||
| Biological process | Photosynthesis | The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj0g3v0074359.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0074359.1, powered by CORGI.
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