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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023618
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.771s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0074359.1
n.a. photosystem I subunit X precursor [Retama raetam] gi|16930767|gb|AAL32043.1|AF439284_1 chr0 27998394 27999026 +
2 domain predictions
2 GO terms
Lj2g3v3249970.1
n.a. Photosystem I subunit K [Theobroma cacao] gi|508705053|gb|EOX96949.1| chr2 41619364 41619892 -
2 domain predictions
2 GO terms
Lj3g3v1933120.1
n.a. PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Cicer arietinum] gi|502127398|ref|XP_004499692.1| chr3 24952441 24953507 -
2 domain predictions
2 GO terms
Lj4g3v0472840.1
n.a. Photosystem I subunit K [Theobroma cacao] gi|508705053|gb|EOX96949.1| chr4 7055191 7055719 +
2 domain predictions
2 GO terms
LotjaGi1g1v0227100.1
n.a. Photosystem I reaction center subunit psaK; TAIR: AT1G30380.1 photosystem I subunit K; Swiss-Prot: sp|Q9SUI5|PSAK_ARATH Photosystem I reaction center subunit psaK, chloroplastic; TrEMBL-Plants: tr|I3SM84|I3SM84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0227100 LjG1.1_chr1 52482649 52484615 +
2 domain predictions
2 GO terms
LotjaGi3g1v0331900.1
n.a. Photosystem I reaction center subunit V; TAIR: AT1G55670.1 photosystem I subunit G; Swiss-Prot: sp|Q9S7N7|PSAG_ARATH Photosystem I reaction center subunit V, chloroplastic; TrEMBL-Plants: tr|I3S5Z3|I3S5Z3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0331900 LjG1.1_chr3 70113104 70115694 -
2 domain predictions
2 GO terms
LotjaGi4g1v0058400.1
n.a. Photosystem I reaction center subunit psaK; TAIR: AT1G30380.1 photosystem I subunit K; Swiss-Prot: sp|Q9SUI5|PSAK_ARATH Photosystem I reaction center subunit psaK, chloroplastic; TrEMBL-Plants: tr|I3SM84|I3SM84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0058400 LjG1.1_chr4 7027648 7031652 +
2 domain predictions
2 GO terms