Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0081039.1

Overview

Field Value
Gene ID Lj0g3v0081039
Transcript ID Lj0g3v0081039.1
Lotus japonicus genome version MG20 v3.0
Description heat shock protein 70 [Saussurea medusa] gi|30962610|gb|AAP42157.1|AF509339_1
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR19375
10 317 308 4.60E-227 –
Gene3D
G3DSA:3.90.640.10
10 78 69 9.10E-29 –
PANTHER
PTHR19375:SF232
10 317 308 4.60E-227 –
Pfam
PF00012
10 332 323 1.10E-114
IPR013126
SUPERFAMILY
SSF53067
11 155 145 1.94E-43 –
Gene3D
G3DSA:3.30.420.40
79 132 54 8.70E-16 –
PRINTS
PR00301
105 121 17 1.50E-38
IPR013126
PRINTS
PR00301
137 157 21 1.50E-38
IPR013126
Gene3D
G3DSA:2.60.34.10
143 329 187 8.60E-78
IPR029047
SUPERFAMILY
SSF100920
160 317 158 4.84E-57
IPR029047
PRINTS
PR00301
164 183 20 1.50E-38
IPR013126
PRINTS
PR00301
245 261 17 1.50E-38
IPR013126
Coils
Coil
289 309 21 – –
SUPERFAMILY
SSF52540
379 449 71 2.19E-09
IPR027417
Gene3D
G3DSA:3.40.50.300
380 444 65 9.20E-07
IPR027417

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj0g3v0081039.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0081039.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.