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Lj0g3v0082369.1

Overview

Field Value
Gene ID Lj0g3v0082369
Transcript ID Lj0g3v0082369.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Glycine max] gi|356514005|ref|XP_003525698.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 16 16
Phobius 1 2 2
SignalP 1 16 16
Phobius 3 10 8
Phobius 11 16 6
MobiDBLite 16 42 27
Phobius 17 636 620
PANTHER 36 53 18 1.40E-237
PANTHER 36 53 18 1.40E-237
MobiDBLite 85 131 47
PANTHER 134 148 15 1.40E-237
PANTHER 134 148 15 1.40E-237
PANTHER 164 570 407 1.40E-237
PANTHER 164 570 407 1.40E-237
MobiDBLite 197 244 48
Gene3D 278 351 74 5.90E-22
SUPERFAMILY 281 576 296 9.85E-81
SMART 284 545 262 3.60E-93
ProSiteProfiles 284 545 262 50.223
Pfam 285 545 261 1.10E-66
ProSitePatterns 290 313 24
Gene3D 352 555 204 1.20E-59
MobiDBLite 562 581 20

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj0g3v0082369.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0082369.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.