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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0084489 |
| Transcript ID | Lj0g3v0084489.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter A family member 7-like isoform X3 [Cicer arietinum] gi|502152094|ref|XP_004508761.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 149 | 149 | – | – | |
| PANTHER | 4 | 408 | 405 | 3.50E-195 | ||
| PANTHER | 4 | 408 | 405 | 3.50E-195 | – | |
| Pfam | 105 | 398 | 294 | 1.90E-16 | – | |
| Phobius | 150 | 170 | 21 | – | – | |
| Phobius | 171 | 189 | 19 | – | – | |
| Phobius | 190 | 213 | 24 | – | – | |
| TMHMM | 191 | 213 | 23 | – | – | |
| Phobius | 214 | 232 | 19 | – | – | |
| Phobius | 233 | 261 | 29 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 262 | 272 | 11 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 273 | 295 | 23 | – | – | |
| Phobius | 296 | 301 | 6 | – | – | |
| TMHMM | 300 | 322 | 23 | – | – | |
| Phobius | 302 | 323 | 22 | – | – | |
| Phobius | 324 | 380 | 57 | – | – | |
| TMHMM | 332 | 349 | 18 | – | – | |
| TMHMM | 381 | 399 | 19 | – | – | |
| Phobius | 381 | 399 | 19 | – | – | |
| Phobius | 400 | 418 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0084489.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0084489.1, powered by CORGI.
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