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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026082
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 33 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.430s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0033079.1
n.a. PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi|502126775|ref|XP_004499432.1| chr0 10474509 10481697 -
2 domain predictions
3 GO terms
Lj0g3v0033249.1
n.a. PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi|502126773|ref|XP_004499431.1| chr0 10524457 10530928 -
2 domain predictions
3 GO terms
Lj0g3v0033289.1
n.a. ABC transporter A family member [Medicago truncatula] gi|357477501|ref|XP_003609036.1| chr0 10534878 10536100 -
2 domain predictions
3 GO terms
Lj0g3v0033299.1
n.a. n.a. chr0 10534878 10536100 -
2 domain predictions
3 GO terms
Lj0g3v0033309.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr0 10536061 10537771 -
2 domain predictions
3 GO terms
Lj0g3v0033319.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr0 10536061 10536987 -
2 domain predictions
3 GO terms
Lj0g3v0033329.1
n.a. PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi|502126775|ref|XP_004499432.1| chr0 10537720 10539162 -
2 domain predictions
3 GO terms
Lj0g3v0082989.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr0 32712625 32718700 -
2 domain predictions
3 GO terms
Lj0g3v0084479.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356513540|ref|XP_003525471.1| chr0 33616709 33617231 +
2 domain predictions
3 GO terms
Lj0g3v0084489.1
n.a. PREDICTED: ABC transporter A family member 7-like isoform X3 [Cicer arietinum] gi|502152094|ref|XP_004508761.1| chr0 33617577 33623229 +
2 domain predictions
3 GO terms
Lj0g3v0084489.2
n.a. PREDICTED: ABC transporter A family member 7-like isoform X3 [Cicer arietinum] gi|502152094|ref|XP_004508761.1| chr0 33617577 33627101 +
2 domain predictions
3 GO terms
Lj0g3v0124469.1
n.a. PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi|502126773|ref|XP_004499431.1| chr0 55936963 55941153 +
2 domain predictions
3 GO terms
Lj0g3v0219679.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356513540|ref|XP_003525471.1| chr0 112298197 112298517 -
2 domain predictions
3 GO terms
Lj0g3v0239829.1
n.a. ABC2 isoform 4 [Theobroma cacao] gi|508774514|gb|EOY21770.1| chr0 124462868 124463698 -
2 domain predictions
3 GO terms
Lj0g3v0239839.1
n.a. PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi|502126775|ref|XP_004499432.1| chr0 124463647 124465089 -
2 domain predictions
3 GO terms
Lj0g3v0326059.1
n.a. ABC transporter A family member [Medicago truncatula] gi|357477501|ref|XP_003609036.1| chr0 170428670 170429945 -
2 domain predictions
3 GO terms
Lj1g3v4241080.1
n.a. PREDICTED: ABC transporter A family member 1-like [Glycine max] gi|356504779|ref|XP_003521172.1| chr1 50064763 50098381 -
2 domain predictions
3 GO terms
Lj1g3v4241080.2
n.a. PREDICTED: ABC transporter A family member 1-like [Glycine max] gi|356504779|ref|XP_003521172.1| chr1 50072993 50098381 -
2 domain predictions
3 GO terms
Lj4g3v1617880.1
n.a. PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi|502126775|ref|XP_004499432.1| chr4 23839404 23859810 -
2 domain predictions
3 GO terms
Lj4g3v1617880.2
n.a. PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi|502126775|ref|XP_004499432.1| chr4 23839404 23849107 -
2 domain predictions
3 GO terms
Lj4g3v1617880.3
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr4 23839404 23854945 -
2 domain predictions
3 GO terms
Lj4g3v1617890.1
n.a. PREDICTED: ABC transporter A family member 7-like isoform X2 [Cicer arietinum] gi|502126777|ref|XP_004499433.1| chr4 23861870 23864028 -
2 domain predictions
3 GO terms
LotjaGi1g1v0216300.1
n.a. ABC transporter A family protein; TAIR: AT3G47730.1 ATP-binding cassette A2; Swiss-Prot: sp|Q84K47|AB2A_ARATH ABC transporter A family member 2; TrEMBL-Plants: tr|V7AXA9|V7AXA9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0216300 LjG1.1_chr1 47816288 47825321 -
2 domain predictions
3 GO terms
LotjaGi1g1v0216300.2
n.a. ABC(ATP-binding) family transporter; TAIR: AT3G47730.1 ATP-binding cassette A2; Swiss-Prot: sp|Q84K47|AB2A_ARATH ABC transporter A family member 2; TrEMBL-Plants: tr|I1KCQ5|I1KCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0216300 LjG1.1_chr1 47817721 47825300 -
2 domain predictions
3 GO terms
LotjaGi1g1v0216500.1
n.a. ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr|A0A0B2RFY8|A0A0B2RFY8_GLYSO ABC transporter A family member 7; Found in the gene: LotjaGi1g1v0216500 LjG1.1_chr1 47862089 47872397 +
2 domain predictions
3 GO terms
LotjaGi1g1v0672100.1
n.a. ABC(ATP-binding) family transporter; TAIR: AT2G41700.1 ATP-binding cassette A1; Swiss-Prot: sp|Q84M24|AB1A_ARATH ABC transporter A family member 1; TrEMBL-Plants: tr|G7KTH7|G7KTH7_MEDTR ABC transporter family protein; Found in the gene: LotjaGi1g1v0672100 LjG1.1_chr1 123644597 123683957 -
2 domain predictions
3 GO terms
LotjaGi1g1v0672100.2
n.a. ABC(ATP-binding) family transporter; TAIR: AT2G41700.1 ATP-binding cassette A1; Swiss-Prot: sp|Q84M24|AB1A_ARATH ABC transporter A family member 1; TrEMBL-Plants: tr|G7KTH7|G7KTH7_MEDTR ABC transporter family protein; Found in the gene: LotjaGi1g1v0672100 LjG1.1_chr1 123645770 123683726 -
2 domain predictions
3 GO terms
LotjaGi1g1v0672100.3
n.a. ABC(ATP-binding) family transporter; TAIR: AT2G41700.1 ATP-binding cassette A1; Swiss-Prot: sp|Q84M24|AB1A_ARATH ABC transporter A family member 1; TrEMBL-Plants: tr|A0A072U3A4|A0A072U3A4_MEDTR ABC transporter family protein; Found in the gene: LotjaGi1g1v0672100 LjG1.1_chr1 123659838 123683726 -
2 domain predictions
3 GO terms
LotjaGi4g1v0247900.1
n.a. ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr|A0A0B2SVW7|A0A0B2SVW7_GLYSO ABC transporter A family member 7; Found in the gene: LotjaGi4g1v0247900 LjG1.1_chr4 59963785 59973430 +
2 domain predictions
3 GO terms
LotjaGi4g1v0247900.2
n.a. ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr|A0A072UQI5|A0A072UQI5_MEDTR ABC transporter A family protein; Found in the gene: LotjaGi4g1v0247900 LjG1.1_chr4 59969277 59973092 +
2 domain predictions
3 GO terms
LotjaGi4g1v0248000.1
n.a. ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr|K7KVX1|K7KVX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0248000 LjG1.1_chr4 59976130 59983914 +
2 domain predictions
3 GO terms
LotjaGi4g1v0248000.2
n.a. ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr|A0A151R0Y3|A0A151R0Y3_CAJCA ABC transporter A family member 7; Found in the gene: LotjaGi4g1v0248000 LjG1.1_chr4 59976213 59983706 +
2 domain predictions
3 GO terms
LotjaGi4g1v0248000.3
n.a. ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr|K7KVX1|K7KVX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0248000 LjG1.1_chr4 59976213 59983706 +
2 domain predictions
3 GO terms