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Lj0g3v0089499.1

Overview

Field Value
Gene ID Lj0g3v0089499
Transcript ID Lj0g3v0089499.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription repressor KAN1-like isoform X1 [Cicer arietinum] gi|502137504|ref|XP_004503104.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31496:SF3
1 204 204 4.20E-192 –
PANTHER
PTHR31496
1 204 204 4.20E-192 –
MobiDBLite
mobidb-lite
1 34 34 – –
MobiDBLite
mobidb-lite
170 197 28 – –
PANTHER
PTHR31496
264 466 203 4.20E-192 –
PANTHER
PTHR31496:SF3
264 466 203 4.20E-192 –
SUPERFAMILY
SSF46689
277 333 57 5.73E-15
IPR009057
Gene3D
G3DSA:1.10.10.60
278 333 56 2.80E-27
IPR009057
TIGRFAM
TIGR01557
280 333 54 1.60E-23
IPR006447
Pfam
PF00249
281 332 52 2.30E-06
IPR001005
MobiDBLite
mobidb-lite
340 407 68 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj0g3v0089499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0089499.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.