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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0089759 |
| Transcript ID | Lj0g3v0089759.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein argonaute 16-like [Glycine max] gi|356546333|ref|XP_003541581.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 510 | 510 | 0 | – | |
| PANTHER | 1 | 510 | 510 | 0 | – | |
| SMART | 49 | 101 | 53 | 3.60E-14 | ||
| Pfam | 51 | 98 | 48 | 1.30E-12 | ||
| SUPERFAMILY | 96 | 258 | 163 | 8.48E-41 | ||
| Gene3D | 100 | 225 | 126 | 7.40E-29 | – | |
| CDD | 101 | 218 | 118 | 4.15E-31 | – | |
| SMART | 102 | 241 | 140 | 0.0061 | ||
| Pfam | 105 | 235 | 131 | 5.00E-27 | ||
| ProSiteProfiles | 126 | 219 | 94 | 12.966 | ||
| SUPERFAMILY | 240 | 495 | 256 | 3.54E-22 | ||
| Pfam | 245 | 290 | 46 | 8.10E-13 | ||
| Gene3D | 278 | 444 | 167 | 1.40E-15 | – | |
| ProSiteProfiles | 388 | 490 | 103 | 14.558 | ||
| Pfam | 388 | 508 | 121 | 7.60E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0089759.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0089759.1, powered by CORGI.
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