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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0091689 |
| Transcript ID | Lj0g3v0091689.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: copper transporter 6-like isoform 1 [Glycine max] gi|356496102|ref|XP_003516909.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 53 | 53 | – | – | |
| PANTHER | 28 | 145 | 118 | 3.70E-67 | ||
| PANTHER | 28 | 145 | 118 | 3.70E-67 | – | |
| TMHMM | 53 | 75 | 23 | – | – | |
| Phobius | 54 | 75 | 22 | – | – | |
| Phobius | 76 | 86 | 11 | – | – | |
| Pfam | 80 | 132 | 53 | 2.10E-11 | ||
| Phobius | 87 | 108 | 22 | – | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 109 | 113 | 5 | – | – | |
| Phobius | 114 | 133 | 20 | – | – | |
| Phobius | 134 | 160 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Copper ion transmembrane transporter activity | Enables the transfer of copper (Cu) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Copper ion transmembrane transport | The directed movement of copper cation across a membrane. |
Expression pattern of Lj0g3v0091689.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0091689.1, powered by CORGI.
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