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Lj0g3v0096849.1

Overview

Field Value
Gene ID Lj0g3v0096849
Transcript ID Lj0g3v0096849.1
Lotus japonicus genome version MG20 v3.0
Description Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 [Medicago truncatula] gi|357438041|ref|XP_003589296.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22844:SF145
1 174 174 3.10E-192 –
PANTHER
PTHR22844
1 174 174 3.10E-192 –
MobiDBLite
mobidb-lite
1 27 27 – –
SMART
SM00320
98 135 38 0.58
IPR001680
Gene3D
G3DSA:2.130.10.10
103 166 64 6.80E-09
IPR015943
SUPERFAMILY
SSF50978
107 175 69 5.23E-56
IPR017986
CDD
cd00200
109 430 322 6.44E-50 –
Pfam
PF00400
109 135 27 0.073
IPR001680
SMART
SM00320
136 173 38 8.2
IPR001680
Gene3D
G3DSA:2.130.10.10
167 177 11 3.50E-46
IPR015943
SUPERFAMILY
SSF50978
208 438 231 5.23E-56
IPR017986
SMART
SM00320
208 247 40 6.00E-06
IPR001680
Gene3D
G3DSA:2.130.10.10
209 435 227 3.50E-46
IPR015943
ProSiteProfiles
PS50294
215 439 225 30.901
IPR017986
PANTHER
PTHR22844
215 459 245 3.10E-192 –
PANTHER
PTHR22844:SF145
215 459 245 3.10E-192 –
ProSiteProfiles
PS50082
215 256 42 13.082
IPR001680
Pfam
PF00400
218 246 29 1.20E-05
IPR001680
PRINTS
PR00320
234 248 15 3.00E-06
IPR020472
SMART
SM00320
250 288 39 5.60E-06
IPR001680
Pfam
PF00400
252 288 37 0.0013
IPR001680
ProSiteProfiles
PS50082
257 288 32 9.94
IPR001680
PRINTS
PR00320
275 289 15 3.00E-06
IPR020472
SMART
SM00320
297 336 40 0.0035
IPR001680
ProSiteProfiles
PS50082
304 336 33 9.105
IPR001680
Pfam
PF00400
307 335 29 0.042
IPR001680
SMART
SM00320
340 377 38 0.013
IPR001680
Pfam
PF00400
345 376 32 6.80E-04
IPR001680
ProSiteProfiles
PS50082
347 376 30 8.67
IPR001680
SMART
SM00320
382 430 49 1.10E-05
IPR001680
Pfam
PF00400
384 430 47 4.70E-05
IPR001680
PRINTS
PR00320
417 431 15 3.00E-06
IPR020472
MobiDBLite
mobidb-lite
446 468 23 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0096849.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0096849.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.