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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0101259 |
| Transcript ID | Lj0g3v0101259.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Solute carrier family 22 member 15-like protein [Medicago truncatula] gi|357452551|ref|XP_003596552.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 341 | 341 | 18.417 | ||
| PANTHER | 1 | 353 | 353 | 7.00E-143 | – | |
| PANTHER | 1 | 353 | 353 | 7.00E-143 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Gene3D | 2 | 95 | 94 | 1.30E-08 | – | |
| SUPERFAMILY | 2 | 116 | 115 | 6.15E-35 | ||
| Pfam | 4 | 345 | 342 | 4.30E-23 | ||
| Phobius | 6 | 29 | 24 | – | – | |
| TMHMM | 9 | 31 | 23 | – | – | |
| ProSitePatterns | 14 | 39 | 26 | – | ||
| Phobius | 30 | 40 | 11 | – | – | |
| TMHMM | 41 | 63 | 23 | – | – | |
| Phobius | 41 | 64 | 24 | – | – | |
| Phobius | 65 | 69 | 5 | – | – | |
| TMHMM | 70 | 89 | 20 | – | – | |
| Phobius | 70 | 89 | 20 | – | – | |
| Phobius | 90 | 171 | 82 | – | – | |
| SUPERFAMILY | 149 | 343 | 195 | 6.15E-35 | ||
| CDD | 171 | 337 | 167 | 5.92E-07 | ||
| TMHMM | 171 | 193 | 23 | – | – | |
| Phobius | 172 | 189 | 18 | – | – | |
| Gene3D | 176 | 338 | 163 | 1.90E-11 | – | |
| Phobius | 190 | 200 | 11 | – | – | |
| TMHMM | 200 | 222 | 23 | – | – | |
| Phobius | 201 | 222 | 22 | – | – | |
| ProSitePatterns | 218 | 234 | 17 | – | ||
| Phobius | 223 | 228 | 6 | – | – | |
| Phobius | 229 | 250 | 22 | – | – | |
| TMHMM | 232 | 254 | 23 | – | – | |
| Phobius | 251 | 255 | 5 | – | – | |
| Phobius | 256 | 279 | 24 | – | – | |
| TMHMM | 259 | 281 | 23 | – | – | |
| Phobius | 280 | 290 | 11 | – | – | |
| Phobius | 291 | 310 | 20 | – | – | |
| Phobius | 311 | 315 | 5 | – | – | |
| TMHMM | 314 | 336 | 23 | – | – | |
| Phobius | 316 | 336 | 21 | – | – | |
| Phobius | 337 | 356 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0101259.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0101259.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.