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Lj0g3v0103939.2

Overview

Field	Value
Gene ID	Lj0g3v0103939
Transcript ID	Lj0g3v0103939.2
Related isoforms 1	Lj0g3v0103939.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: ABC transporter G family member 36-like [Glycine max] gi\|356526083\|ref\|XP_003531649.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR19241:SF246 View details on PTHR19241:SF246 Search for proteins/transripts with this domain View external data on PTHR19241:SF246	1	272	272	3.30E-224	–
PANTHER	PTHR19241 View details on PTHR19241 Search for proteins/transripts with this domain View external data on PTHR19241	1	272	272	3.30E-224	–
SUPERFAMILY	SSF52540 View details on SSF52540 Search for proteins/transripts with this domain View external data on SSF52540	9	183	175	1.66E-25	IPR027417 Show description in modal box View details on IPR027417 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF00005 View details on PF00005 Search for proteins/transripts with this domain View external data on PF00005	13	126	114	5.20E-10	IPR003439 Show description in modal box View details on IPR003439 Search for proteins/transripts with this domain View on EBI InterPro Service
Gene3D	G3DSA:3.40.50.300 View details on G3DSA:3.40.50.300 Search for proteins/transripts with this domain View external data on G3DSA:3.40.50.300	13	184	172	4.60E-31	IPR027417 Show description in modal box View details on IPR027417 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005524 View details of GO:0005524 AmiGO InterPro QuickGO	Molecular function	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.	Subterm of View details of GO:0008144 View details of GO:0032559 View details of GO:0035639
GO:0016887 View details of GO:0016887 AmiGO InterPro QuickGO	Molecular function	ATPase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.	Subterm of View details of GO:0017111

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj0g3v0103939.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0103939.2, powered by CORGI.

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