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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF00005
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 535 results. Now displaying 1 of 11 with 50 rows per page. This search has taken 0.160s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0014269.1
n.a. PREDICTED: ABC transporter I family member 19-like [Cicer arietinum] gi|502114917|ref|XP_004495081.1| chr0 5463570 5468553 -
2 domain predictions
2 GO terms
Lj0g3v0033249.1
n.a. PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi|502126773|ref|XP_004499431.1| chr0 10524457 10530928 -
2 domain predictions
2 GO terms
Lj0g3v0033309.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr0 10536061 10537771 -
2 domain predictions
2 GO terms
Lj0g3v0033319.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr0 10536061 10536987 -
2 domain predictions
2 GO terms
Lj0g3v0041889.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 13755005 13768595 +
2 domain predictions
2 GO terms
Lj0g3v0041899.1
n.a. PREDICTED: ABC transporter C family member 2-like [Glycine max] gi|356508251|ref|XP_003522872.1| chr0 13770401 13778552 +
2 domain predictions
2 GO terms
Lj0g3v0048519.1
n.a. PREDICTED: ABC transporter B family member 28-like [Glycine max] gi|356530907|ref|XP_003534020.1| chr0 16341719 16348251 -
2 domain predictions
2 GO terms
Lj0g3v0048519.2
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr0 16341719 16348251 -
2 domain predictions
2 GO terms
Lj0g3v0060349.1
n.a. ABC transporter I family member 1 [Arabidopsis thaliana] gi|15221728|ref|NP_176516.1| chr0 20085353 20087054 +
2 domain predictions
2 GO terms
Lj0g3v0065079.1
n.a. ABC transporter G family member [Medicago truncatula] gi|357443805|ref|XP_003592180.1| chr0 22615411 22618188 +
2 domain predictions
2 GO terms
Lj0g3v0066079.1
n.a. PREDICTED: ABC transporter B family member 4-like [Glycine max] gi|356499544|ref|XP_003518599.1| chr0 23131074 23138102 +
2 domain predictions
2 GO terms
Lj0g3v0066219.1
n.a. PREDICTED: ABC transporter F family member 4-like isoform X1 [Cicer arietinum] gi|502102241|ref|XP_004492011.1| chr0 23235805 23238545 -
2 domain predictions
2 GO terms
Lj0g3v0068559.1
n.a. n.a. chr0 24564625 24570218 +
2 domain predictions
2 GO terms
Lj0g3v0068559.3
n.a. n.a. chr0 24565605 24570218 +
2 domain predictions
2 GO terms
Lj0g3v0070149.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 25500628 25508114 -
2 domain predictions
2 GO terms
Lj0g3v0077889.1
n.a. ABC transporter D family member [Medicago truncatula] gi|357463371|ref|XP_003601967.1| chr0 29945243 29949461 -
2 domain predictions
2 GO terms
Lj0g3v0077889.2
n.a. PREDICTED: ABC transporter D family member 1-like isoform 1 [Glycine max] gi|356540293|ref|XP_003538624.1| chr0 29945243 29949461 -
2 domain predictions
2 GO terms
Lj0g3v0080329.1
n.a. PREDICTED: ABC transporter G family member 11-like [Glycine max] gi|356524824|ref|XP_003531028.1| chr0 31154944 31156930 +
2 domain predictions
2 GO terms
Lj0g3v0082989.1
n.a. PREDICTED: ABC transporter A family member 7-like [Glycine max] gi|356508588|ref|XP_003523037.1| chr0 32712625 32718700 -
2 domain predictions
2 GO terms
Lj0g3v0084489.2
n.a. PREDICTED: ABC transporter A family member 7-like isoform X3 [Cicer arietinum] gi|502152094|ref|XP_004508761.1| chr0 33617577 33627101 +
2 domain predictions
2 GO terms
Lj0g3v0088939.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 36412676 36417842 -
2 domain predictions
2 GO terms
Lj0g3v0103939.1
n.a. ABC transporter family pleiotropic drug resistance protein [Medicago truncatula] gi|357513493|ref|XP_003627035.1| chr0 44399646 44401290 -
2 domain predictions
2 GO terms
Lj0g3v0103939.2
n.a. PREDICTED: ABC transporter G family member 36-like [Glycine max] gi|356526083|ref|XP_003531649.1| chr0 44399834 44401290 -
2 domain predictions
2 GO terms
Lj0g3v0104499.1
n.a. ABC transporter G family member [Medicago truncatula] gi|357485323|ref|XP_003612949.1| chr0 44728048 44732411 +
2 domain predictions
2 GO terms
Lj0g3v0105229.1
n.a. Non-intrinsic ABC protein 10 [Theobroma cacao] gi|508782333|gb|EOY29589.1| chr0 45100970 45102553 -
2 domain predictions
2 GO terms
Lj0g3v0186649.1
n.a. PREDICTED: ABC transporter G family member 11-like [Glycine max] gi|356524824|ref|XP_003531028.1| chr0 91011153 91012676 -
2 domain predictions
2 GO terms
Lj0g3v0188219.1
n.a. PREDICTED: ABC transporter C family member 3-like [Glycine max] gi|356524338|ref|XP_003530786.1| chr0 91905530 91907730 -
2 domain predictions
2 GO terms
Lj0g3v0211629.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 106650389 106656979 +
2 domain predictions
2 GO terms
Lj0g3v0211639.1
n.a. PREDICTED: ABC transporter C family member 12-like [Fragaria vesca subsp]. vesca] gi|470108553|ref|XP_004290580.1| chr0 106657830 106658414 +
2 domain predictions
2 GO terms
Lj0g3v0222689.1
n.a. PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| chr0 114613500 114618750 -
2 domain predictions
2 GO terms
Lj0g3v0230649.1
n.a. PREDICTED: ABC transporter F family member 3-like [Glycine max] gi|356575104|ref|XP_003555682.1| chr0 119498607 119499312 +
2 domain predictions
2 GO terms
Lj0g3v0241969.1
n.a. PREDICTED: ABC transporter G family member 21-like [Cicer arietinum] gi|502118333|ref|XP_004496215.1| chr0 125539178 125544861 -
2 domain predictions
2 GO terms
Lj0g3v0242219.1
n.a. PREDICTED: ABC transporter G family member 24-like [Glycine max] gi|356500329|ref|XP_003518985.1| chr0 125676983 125679278 +
2 domain predictions
2 GO terms
Lj0g3v0242229.1
n.a. n.a. chr0 125677653 125678409 -
2 domain predictions
2 GO terms
Lj0g3v0246249.1
n.a. PREDICTED: ABC transporter C family member 13-like [Glycine max] gi|356547472|ref|XP_003542136.1| chr0 127549679 127557918 +
2 domain predictions
2 GO terms
Lj0g3v0246249.2
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 13-like [Cicer arietinum] gi|502080578|ref|XP_004486609.1| chr0 127549679 127553617 +
2 domain predictions
2 GO terms
Lj0g3v0249719.1
n.a. PREDICTED: ABC transporter C family member 12-like [Cicer arietinum] gi|502174413|ref|XP_004515510.1| chr0 129453228 129458543 -
2 domain predictions
2 GO terms
Lj0g3v0249749.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 129458783 129461158 -
2 domain predictions
2 GO terms
Lj0g3v0252699.1
n.a. PREDICTED: pleiotropic drug resistance protein 2-like [Cicer arietinum] gi|502174313|ref|XP_004515482.1| chr0 131109876 131121879 +
2 domain predictions
2 GO terms
Lj0g3v0255929.1
n.a. PREDICTED: ABC transporter G family member 31-like [Cicer arietinum] gi|502129273|ref|XP_004500246.1| chr0 132911384 132914623 -
2 domain predictions
2 GO terms
Lj0g3v0258479.1
n.a. PREDICTED: ABC transporter G family member 7-like [Glycine max] gi|356536210|ref|XP_003536632.1| chr0 134192185 134195112 +
2 domain predictions
2 GO terms
Lj0g3v0272489.1
n.a. PREDICTED: ABC transporter G family member 21-like [Glycine max] gi|356502704|ref|XP_003520157.1| chr0 141196409 141204096 +
2 domain predictions
2 GO terms
Lj0g3v0285989.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357463203|ref|XP_003601883.1| chr0 148513399 148520767 +
2 domain predictions
2 GO terms
Lj0g3v0300949.1
n.a. PREDICTED: ABC transporter C family member 3-like [Glycine max] gi|356566246|ref|XP_003551345.1| chr0 156405919 156408814 -
2 domain predictions
2 GO terms
Lj0g3v0304749.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158742776 158749005 +
2 domain predictions
2 GO terms
Lj0g3v0304759.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158746892 158750007 +
2 domain predictions
2 GO terms
Lj0g3v0306379.1
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 159858016 159866960 +
2 domain predictions
2 GO terms
Lj0g3v0306379.2
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 159858016 159866960 +
2 domain predictions
2 GO terms
Lj0g3v0312759.1
n.a. PREDICTED: ABC transporter F family member 3-like [Glycine max] gi|356575104|ref|XP_003555682.1| chr0 163318246 163328302 +
2 domain predictions
2 GO terms
Lj0g3v0317109.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 165627202 165636355 +
2 domain predictions
2 GO terms