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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0106319 |
| Transcript ID | Lj0g3v0106319.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356544808|ref|XP_003540839.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 150 | 150 | 1.10E-34 | ||
| CDD | 1 | 416 | 416 | 2.98E-157 | – | |
| PANTHER | 1 | 436 | 436 | 0 | – | |
| PANTHER | 1 | 436 | 436 | 0 | – | |
| TIGRFAM | 1 | 387 | 387 | 6.00E-91 | ||
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 29 | 46 | 18 | – | – | |
| Phobius | 47 | 65 | 19 | – | – | |
| Phobius | 66 | 90 | 25 | – | – | |
| TMHMM | 67 | 89 | 23 | – | – | |
| Phobius | 91 | 95 | 5 | – | – | |
| Phobius | 96 | 117 | 22 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 118 | 128 | 11 | – | – | |
| Phobius | 129 | 151 | 23 | – | – | |
| TMHMM | 134 | 156 | 23 | – | – | |
| Phobius | 152 | 156 | 5 | – | – | |
| Phobius | 157 | 182 | 26 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 183 | 207 | 25 | – | – | |
| Phobius | 208 | 230 | 23 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Pfam | 212 | 373 | 162 | 1.50E-31 | ||
| Phobius | 231 | 241 | 11 | – | – | |
| Phobius | 242 | 263 | 22 | – | – | |
| TMHMM | 247 | 269 | 23 | – | – | |
| Phobius | 264 | 283 | 20 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 284 | 309 | 26 | – | – | |
| Phobius | 310 | 328 | 19 | – | – | |
| TMHMM | 326 | 348 | 23 | – | – | |
| Phobius | 329 | 348 | 20 | – | – | |
| Phobius | 349 | 354 | 6 | – | – | |
| Phobius | 355 | 379 | 25 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 380 | 384 | 5 | – | – | |
| Phobius | 385 | 406 | 22 | – | – | |
| TMHMM | 387 | 406 | 20 | – | – | |
| Coils | 407 | 427 | 21 | – | – | |
| Phobius | 407 | 442 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0106319.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0106319.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.