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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0112459 |
| Transcript ID | Lj0g3v0112459.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | sulphate transporter [Astragalus glycyphyllos] gi|291482268|emb|CBK55656.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 146 | 146 | – | – | |
| PANTHER | 7 | 652 | 646 | 0 | ||
| PANTHER | 7 | 652 | 646 | 0 | ||
| TIGRFAM | 82 | 645 | 564 | 2.60E-213 | ||
| Pfam | 95 | 474 | 380 | 4.10E-129 | ||
| TMHMM | 147 | 164 | 18 | – | – | |
| Phobius | 147 | 163 | 17 | – | – | |
| Phobius | 164 | 174 | 11 | – | – | |
| Phobius | 175 | 198 | 24 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 199 | 203 | 5 | – | – | |
| Phobius | 204 | 223 | 20 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 224 | 259 | 36 | – | – | |
| TMHMM | 255 | 277 | 23 | – | – | |
| Phobius | 260 | 278 | 19 | – | – | |
| Phobius | 279 | 283 | 5 | – | – | |
| TMHMM | 284 | 306 | 23 | – | – | |
| Phobius | 284 | 305 | 22 | – | – | |
| Phobius | 306 | 412 | 107 | – | – | |
| TMHMM | 337 | 359 | 23 | – | – | |
| TMHMM | 412 | 431 | 20 | – | – | |
| Phobius | 413 | 434 | 22 | – | – | |
| Phobius | 435 | 439 | 5 | – | – | |
| Phobius | 440 | 463 | 24 | – | – | |
| TMHMM | 441 | 463 | 23 | – | – | |
| Phobius | 464 | 469 | 6 | – | – | |
| Phobius | 470 | 498 | 29 | – | – | |
| TMHMM | 476 | 498 | 23 | – | – | |
| Phobius | 499 | 656 | 158 | – | – | |
| ProSiteProfiles | 526 | 649 | 124 | 29.165 | ||
| Pfam | 527 | 645 | 119 | 3.00E-32 | ||
| CDD | 527 | 642 | 116 | 4.33E-26 | – | |
| SUPERFAMILY | 528 | 650 | 123 | 5.49E-21 | ||
| Gene3D | 530 | 649 | 120 | 8.50E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0112459.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0112459.1, powered by CORGI.
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